Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0456 ATGAAGAAAGCTCTCCCTAGAATGGCCAAACCAAAAACAACCACACCGATTTTCCTCTTATTCTTCTTCATTCAAATGCTCTTCACCATCCTTGTTAACTCGTACACTCCTACTGAAGATTTCGCAATCAATTGCGGCTTTTCCGGCGATTCACCTGATCAACAAGGCCATCGTAGCTGGACCGGAGACGTTGGCTCCAAACTTTTTTCTCCCATCGAACCAAAAACCGGCGACGTCTCCGCCGTCGCCAAGGCTCTGGTCAGCAAAGGAATCCCCTACGCCACCGCGCGCGTCTCTCGCTCCGAATTCACATACTCATTTCCGGTCACCGACGGCCAAAAGTTCATTCGCCTCCATTTTTACCCATTTTCATACCTAGATTTCGACCGCTCCAACTCCCTCTTCTCCGTCAAAGCAGGACCACACACCCTTCTTAAGGACTTCAACGCTTCACTCACTGCCGACAACGATGAAGACGTTTCGGAAGACATTATAGTCAAAGAATACTGCGTCAACATTGCACCTGGCCAGAGGCTAAACATAACCTTCACGCCTGGCCCCTTTCATCCAAACGCCTATGCCTTCATTAACGGGATCGAGGTGGTGTCTATGCCTACGAATCTTTACTACACCAACCCAGACGACTACACCAACCCAGGGATGGAGCTAAACGGGGAAAACAACCTGTTTCGGGTGAAAAACAGTAGTTCTCTTGAGACAGCATACAGAATCAACGTTGGAGGGAGCCAAATCCCTCGCGACAAAGACACCGGCATGTTTCGTTACTGGGACGAGGATAATCGTTACTTGGAGATGCAGCACCCACGTAGCGTATCAGCAGGGATTGGTCTTAAACTAATTTACAAAGATGGTCAGAATAATAATTTCACTGCACCGGATGAAGTATACTTAACTGCACGATCCTACGGGATGAACGAGACCTCGAAATATAATGTGACTTGGGAGTTTGAGGTGGACTCAGAGTTTACTTACATGGTGAGATTGCATTTTTGTGAGTTTGATCAAAAGATCCAGAAAGTTGGAGATAGAGTCTTTCAGATCTTCATAGCTGATACTTTGGTTGAGAGTCATGCTGATGTGATAGAGTGGAGTGAGGGTAATCTAATTCCTGTTCATAAGGACTACGCTGTGCGGATGTTTAGCACAGGAAGTTTGAAGATGAAGAAACTCAATCTTTCTATCAAGTTGCGACCACACCCAGATCCAAAAGTTAGCAGTTATAATGACGTGATATTGAATGGCATCGAAGTTTTGAAAAATAATGACGGCAACGACAACCTCGGAGGTTTAAATCCCGACCCGCGTCTATCTCCCTCCCCGCCATTGCTGCCATTGATGAAGACATCAAAAAACTCGAAGAAAACCACGGTAATTCCCATTGTTGTCGGTGTAGCTTCAGGCTTCCTTGTGCTATCTCTTGTCGTTTTGTTCATTTCCCGGCGATCGACTAGGTCTCCGGTCAACGACGGAAGTTCATGGTCGGGGGGACAAAAATCTGCAGCCACGTCAACCAAAACAAGCAAGACCCATGTTTCATCATTGCCGTCCAATTTGTGTCGACGCTTTTCAATCGTTGAGATCAGAGTAGCCACAAACAACTTCGATGATATTTTCATAGTAGGCGTTGGAGGGTTTGGTAATGTGTATAAAGGTTACATTGATGACGGTACGGTTCCCGTAGCAATCAAACGGCTCAAACCGGGCTCGCAGCAAGGAGCCGACGAGTTCCTTACTGAGATAGAAATGCTCTCTCAACTTCGCCATCTTCACTTGGTTTCTCTCATCGGTTATTGCTACGATTCCAACGAGATGATCCTCGTGTACGAGTTTATGGCACGTGGGACCCTTCGTGATCATCTGTTCGAATCTGATAACGAACCACTTTCTTGGAAACAAAGACTAGAGATTTGCCTTGGTGCAGCTAAAGGACTGCATTATCTTCATACAGGTGCGAAGCACAGTATCATTCATCGCGACGTGAAGACAACGAACATTTTAATAGACGAGAAATGGGTGGCGAAAGTTTCGGATTTCGGCCTATCCAAAATAGGACCCACGGGGATGTCAAGATCTCACATAAGCACAGTAGTAAAAGGGAGCGTCGGGTATTTGGATCCGGAATACTACAAGCGTCAACGGTTGACTCAGAAGTCTGACGTGTACTCGTTTGGAGTGGTGCTGCTTGAGGTATTGTGTGGGAGACCACCTATCCTACGTATGGCGGAGAAGCAGAAAGCAAGCTTAGTAGAGTGGGTCCGGAAATGCCATCAAAAGGGTGAGATTGATCAAACGGTTGATATGTTCTTGAAAGATAGCGTCAGGCCAGAGTGCTTAAAAGCTTTCGGTGATATGGCGTTAAGTTGTTTGTTAGATGATGGGAATCAACGGCCATCGATGGGTGATGTGGTGTGGACCCTTGAGTTTGCGTTGGAGCTGCAAGAGAGCACAGAGGAAAGAGGGCTTGATGGGATCGTTGAGGAAGAGAGAGTGCTATTGAAAAAGGGGAAGAATGAGGAAGAAGAAAGTGGAGTGGGATTTACGAGTAGTAAAGCAACTGGGAGTGAATCAAACACCAGCAGGATGACCATTTCTAGCAGTGAGGAGCAAGCTTTGGTTTCTGGGACGGTCTTCTCGGAGCTTAGGGACCCGACGGTACGATGA 2682 0.4676 MKKALPRMAKPKTTTPIFLLFFFIQMLFTILVNSYTPTEDFAINCGFSGDSPDQQGHRSWTGDVGSKLFSPIEPKTGDVSAVAKALVSKGIPYATARVSRSEFTYSFPVTDGQKFIRLHFYPFSYLDFDRSNSLFSVKAGPHTLLKDFNASLTADNDEDVSEDIIVKEYCVNIAPGQRLNITFTPGPFHPNAYAFINGIEVVSMPTNLYYTNPDDYTNPGMELNGENNLFRVKNSSSLETAYRINVGGSQIPRDKDTGMFRYWDEDNRYLEMQHPRSVSAGIGLKLIYKDGQNNNFTAPDEVYLTARSYGMNETSKYNVTWEFEVDSEFTYMVRLHFCEFDQKIQKVGDRVFQIFIADTLVESHADVIEWSEGNLIPVHKDYAVRMFSTGSLKMKKLNLSIKLRPHPDPKVSSYNDVILNGIEVLKNNDGNDNLGGLNPDPRLSPSPPLLPLMKTSKNSKKTTVIPIVVGVASGFLVLSLVVLFISRRSTRSPVNDGSSWSGGQKSAATSTKTSKTHVSSLPSNLCRRFSIVEIRVATNNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKPGSQQGADEFLTEIEMLSQLRHLHLVSLIGYCYDSNEMILVYEFMARGTLRDHLFESDNEPLSWKQRLEICLGAAKGLHYLHTGAKHSIIHRDVKTTNILIDEKWVAKVSDFGLSKIGPTGMSRSHISTVVKGSVGYLDPEYYKRQRLTQKSDVYSFGVVLLEVLCGRPPILRMAEKQKASLVEWVRKCHQKGEIDQTVDMFLKDSVRPECLKAFGDMALSCLLDDGNQRPSMGDVVWTLEFALELQESTEERGLDGIVEEERVLLKKGKNEEEESGVGFTSSKATGSESNTSRMTISSSEEQALVSGTVFSELRDPTVR 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0456 893 Pfam Protein tyrosine and serine/threonine kinase 547 780 IPR001245 GO:0004672|GO:0006468
Glsi12g0456 893 Pfam Malectin-like domain 43 425 IPR024788 -
Glsi12g0456 893 Gene3D Transferase(Phosphotransferase) domain 1 618 834 - -
Glsi12g0456 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Glsi12g0456 893 MobiDBLite consensus disorder prediction 842 875 - -
Glsi12g0456 893 FunFam Receptor-like protein kinase FERONIA 618 834 - -
Glsi12g0456 893 FunFam FERONIA receptor-like kinase 40 205 - -
Glsi12g0456 893 Gene3D - 40 205 - -
Glsi12g0456 893 Gene3D - 237 429 - -
Glsi12g0456 893 MobiDBLite consensus disorder prediction 491 518 - -
Glsi12g0456 893 CDD STKc_IRAK 547 814 - -
Glsi12g0456 893 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Glsi12g0456 893 PANTHER OS03G0124300 PROTEIN-RELATED 18 501 IPR046957 GO:0004672
Glsi12g0456 893 SUPERFAMILY Protein kinase-like (PK-like) 514 816 IPR011009 -
Glsi12g0456 893 Gene3D Phosphorylase Kinase; domain 1 501 617 - -
Glsi12g0456 893 ProSiteProfiles Protein kinase domain profile. 541 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0456 893 MobiDBLite consensus disorder prediction 851 875 - -
Glsi12g0456 893 SMART serkin_6 541 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0456 893 FunFam FERONIA receptor-like kinase 236 428 - -
Glsi12g0456 893 FunFam Receptor-like protein kinase FERONIA 513 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0456 Glsi-ChrGlsi12 15776013 15778694 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0456 30 893 Receptor kinase-like Gene Family AT3G51550 46.249 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0456 Malectin_like 3.1e-40 CL0202