Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0451 ATGGCTATTTTCTTCTGCTGGGGAAAGGGTTGCAGCTCGCTTGAGGAAAAAGCTATTCTTCTACCTAATCTATCAAGTGAAGTGAGGCTTTCTGAAGACACCCAAATCATTAAAAATGCTGCAACCATAAATCTCTCTGGCGCTCTTCAGAATATAAGTACTGCTTTTATAGTGTTGGCTTTAGCTGTGGTGCCAATTGTTTCAATTGGTGTACGAAAATCTGGACACTATCTTTGTGAACTGTCACACAGAACTCAAGCAGCCGCTGCTGCTGCATCAATTGCTAAGGAAGTGGTTGGTCTATTTTCTGGAGGTGTAAATGCAGCATCCACACTAACTGCTTTTCTTGTGGTCATATATGGGGCATCCCTGGTATTCACAGGTTCCATGACTGCTGGATCTCTAACATCATTCATCTTATATAGCCTTACAGTTGGGTTGTTTTATACTGAACAGGCCTGTTTTCGATCGAAAATGAAAGACCGGAGTAAATGTACCAGTGAATTTGAACCTGACAAGCTTTTGAAGCTGAGAAAGACACACCTAGTACTAGATCATATTTTCTTCAAAATATCATTCGAGAATGGTGTTATTATGGTCCCTCGGTCACCTTGCTTCAACTTTAGAAAATGAATAACTCTGCATTTAAGGCCTGGTTCAAAAGTTCCCATCGTCATCAGTCCAAGTAGTGGTGGAAAGACTGCAATAGCAAAGAAAATGGCTAATGCTCATGAGTTCTTAGAGAAGTTTCCAGAGAAATACCAAACTGTTGTTGGAGAACGTGGATTGAGGCCATCGGGTGGCCAGAAACAAAGAATAGCAATTGCAAGAGCATTACTTCTGAATCCAAGTATTCTGCTATTGGATGAAGCCACCAGTGCTCTTGATGCAGAGAGTGAGTATCTTGTTCAAGTGAGAATGGCATCTTAA 930 0.4118 MAIFFCWGKGCSSLEEKAILLPNLSSEVRLSEDTQIIKNAATINLSGALQNISTAFIVLALAVVPIVSIGVRKSGHYLCELSHRTQAAAAAASIAKEVVGLFSGGVNAASTLTAFLVVIYGASLVFTGSMTAGSLTSFILYSLTVGLFYTEQACFRSKMKDRSKCTSEFEPDKLLKLRKTHLVLDHIFFKISFENGVIMVPRSPCFNFRKXITLHLRPGSKVPIVISPSSGGKTAIAKKMANAHEFLEKFPEKYQTVVGERGLRPSGGQKQRIAIARALLLNPSILLLDEATSALDAESEYLVQVRMAS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0451 309 SUPERFAMILY ABC transporter transmembrane region 29 147 IPR036640 GO:0005524|GO:0016020
Glsi12g0451 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 306 IPR027417 -
Glsi12g0451 309 Gene3D - 237 305 IPR027417 -
Glsi12g0451 309 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 83 237 IPR039421 -
Glsi12g0451 309 Gene3D ABC transporter type 1, transmembrane domain 27 153 IPR036640 GO:0005524|GO:0016020
Glsi12g0451 309 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 98 145 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi12g0451 309 Pfam ABC transporter 227 293 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0451 Glsi-ChrGlsi12 15615011 15621223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0451 237 304 Calmodulin-binding Proteins AT2G36910 72.059 2.50e-24 101