Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0437 ATGAATACTAAAAGTTCAGAAGAAACAGATTTTCCGTTAAAACTGGAAGGCAATATTTCAAGTGATCATGACAAAGCGAATAAAGCTTCTTCAAGCAGCAGCTCAGCACAATGGTTAAGATTGAAGGATCCAAGGATTGTGAGGGTATCAAGAGCCTTTGGGGGAAAAGATAGACACAGCAAGGTTTGCACAGTAAGAGGGTTGAGGGATAGGCGAGTCAGGCTTTCTGTATCCACTGCTATTCAGCTATATGATCTTCAAGATAGGCTAGGGTTCAATCAACCCAGTAAGGTTGTAGATTGGTTGCTTAATGCAGCTAAGGATGAAATTGATGACCTTCCACCTCTTCAAATGCCACCTTCAGGTAGCTTCAGCCTATGCCCTCCATCTGCTATAACTTCTAGGAATAATGAAGTTAGCCCTTCTCAGCCTGATGGAGAGGGGTTAAATATCAATGAAAGTGGACATAATTGGGAAGGCTCTTCAAAGTCTAAGGTTTCAAGAGAAATGATGGTTACTGAGAAAGAAAATTGGAATAGAAGGGAAGAGGATGATAGAGATAATCTATTATCAAGAGCAAATCATCCTTCGTTTCTGGGTTTGCTGAATACTATGCCACTTGGTTATAATAACCAATGGGAGCCTTCGGGTGGCGATGTTACACACTCAGGAAGCCATGGATTTACAAACCAGGCAGATTTACACAGCATTAACGTTGTACCTTTCCCAGCATCATCAACCTTGTCTTTATCAACTGGGACTTCTCAGTTTTTGGCGTGTCCTCCTCCTGCTGGAGCAACACAGTCATATTTCCCAGGTTCCCACAGTATTGCTGCAATGGATATGGATCCAAGGCAAATTAATCAGTATCAGATGTTGGGCTCATCATCAAGTTCTCAAAATTTCTTATCAAATTCTCTGGGTCCATCTCTATACTCTATGAGCCAATCCGTGAAGCCTTTCAGCTTGAGTATGATGACTCCAAAACTTCTCCATTCACCTAATAGCAGTGAAAGCCAATCCCATAAAGACCGGGTTTTTCCTTCCAAATGA 1053 0.4179 MNTKSSEETDFPLKLEGNISSDHDKANKASSSSSSAQWLRLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVSTAIQLYDLQDRLGFNQPSKVVDWLLNAAKDEIDDLPPLQMPPSGSFSLCPPSAITSRNNEVSPSQPDGEGLNINESGHNWEGSSKSKVSREMMVTEKENWNRREEDDRDNLLSRANHPSFLGLLNTMPLGYNNQWEPSGGDVTHSGSHGFTNQADLHSINVVPFPASSTLSLSTGTSQFLACPPPAGATQSYFPGSHSIAAMDMDPRQINQYQMLGSSSSSQNFLSNSLGPSLYSMSQSVKPFSLSMMTPKLLHSPNSSESQSHKDRVFPSK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0437 350 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Glsi12g0437 350 MobiDBLite consensus disorder prediction 129 167 - -
Glsi12g0437 350 Pfam TCP family transcription factor 55 181 IPR017887 -
Glsi12g0437 350 MobiDBLite consensus disorder prediction 1 36 - -
Glsi12g0437 350 MobiDBLite consensus disorder prediction 129 168 - -
Glsi12g0437 350 MobiDBLite consensus disorder prediction 329 350 - -
Glsi12g0437 350 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 300 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0437 Glsi-ChrGlsi12 15240105 15241157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0437 38 292 TCP Transcription Factor Family AT3G02150 41.729 3.34e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi12g0437 TCP 2.7e-30 No_clan