LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g0437	ATGAATACTAAAAGTTCAGAAGAAACAGATTTTCCGTTAAAACTGGAAGGCAATATTTCAAGTGATCATGACAAAGCGAATAAAGCTTCTTCAAGCAGCAGCTCAGCACAATGGTTAAGATTGAAGGATCCAAGGATTGTGAGGGTATCAAGAGCCTTTGGGGGAAAAGATAGACACAGCAAGGTTTGCACAGTAAGAGGGTTGAGGGATAGGCGAGTCAGGCTTTCTGTATCCACTGCTATTCAGCTATATGATCTTCAAGATAGGCTAGGGTTCAATCAACCCAGTAAGGTTGTAGATTGGTTGCTTAATGCAGCTAAGGATGAAATTGATGACCTTCCACCTCTTCAAATGCCACCTTCAGGTAGCTTCAGCCTATGCCCTCCATCTGCTATAACTTCTAGGAATAATGAAGTTAGCCCTTCTCAGCCTGATGGAGAGGGGTTAAATATCAATGAAAGTGGACATAATTGGGAAGGCTCTTCAAAGTCTAAGGTTTCAAGAGAAATGATGGTTACTGAGAAAGAAAATTGGAATAGAAGGGAAGAGGATGATAGAGATAATCTATTATCAAGAGCAAATCATCCTTCGTTTCTGGGTTTGCTGAATACTATGCCACTTGGTTATAATAACCAATGGGAGCCTTCGGGTGGCGATGTTACACACTCAGGAAGCCATGGATTTACAAACCAGGCAGATTTACACAGCATTAACGTTGTACCTTTCCCAGCATCATCAACCTTGTCTTTATCAACTGGGACTTCTCAGTTTTTGGCGTGTCCTCCTCCTGCTGGAGCAACACAGTCATATTTCCCAGGTTCCCACAGTATTGCTGCAATGGATATGGATCCAAGGCAAATTAATCAGTATCAGATGTTGGGCTCATCATCAAGTTCTCAAAATTTCTTATCAAATTCTCTGGGTCCATCTCTATACTCTATGAGCCAATCCGTGAAGCCTTTCAGCTTGAGTATGATGACTCCAAAACTTCTCCATTCACCTAATAGCAGTGAAAGCCAATCCCATAAAGACCGGGTTTTTCCTTCCAAATGA	1053	0.4179	MNTKSSEETDFPLKLEGNISSDHDKANKASSSSSSAQWLRLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVSTAIQLYDLQDRLGFNQPSKVVDWLLNAAKDEIDDLPPLQMPPSGSFSLCPPSAITSRNNEVSPSQPDGEGLNINESGHNWEGSSKSKVSREMMVTEKENWNRREEDDRDNLLSRANHPSFLGLLNTMPLGYNNQWEPSGGDVTHSGSHGFTNQADLHSINVVPFPASSTLSLSTGTSQFLACPPPAGATQSYFPGSHSIAAMDMDPRQINQYQMLGSSSSSQNFLSNSLGPSLYSMSQSVKPFSLSMMTPKLLHSPNSSESQSHKDRVFPSK	350

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g0437	350	ProSiteProfiles	TCP domain profile.	55	113	IPR017887	-
	Glsi12g0437	350	MobiDBLite	consensus disorder prediction	129	167	-	-
	Glsi12g0437	350	Pfam	TCP family transcription factor	55	181	IPR017887	-
	Glsi12g0437	350	MobiDBLite	consensus disorder prediction	1	36	-	-
	Glsi12g0437	350	MobiDBLite	consensus disorder prediction	129	168	-	-
	Glsi12g0437	350	MobiDBLite	consensus disorder prediction	329	350	-	-
	Glsi12g0437	350	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	28	300	IPR005333	GO:0003700

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g0437	Glsi-ChrGlsi12	15240105	15241157	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g0437	38	292	TCP Transcription Factor Family	AT3G02150	41.729	3.34e-47	162

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Glsi12g0437		TCP	2.7e-30	No_clan

Showing 1 to 1 of 1 entries