Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0435 ATGTGGGTTGGTCTGATTGGATGCTGGAATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCCAATCTGCCTCTTGAAAATCTGCTAGATATAGAGAAGCTTGACAATCAGCCTTTTGCTCCTCTGACTTCAAATGAAGTGCATGAAGTGAAGTCTGTGCAAACACCCTCTGTAGTTGACATGAAGACATTTGATTCTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCTTGTTCGTAAGAATATTAAGTCAGCCAACATACTGCTTGATGCGGAGCTTAATCCTCATCTTTCTGACTCTGGATTGGCAGGCTATATTCCAAATGCAGACCAGTTCTTGAACCATAATTCTGGATCTGGATATGATGCACCTGAGGTTGCCTTGTCTGATCAGTATACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCTGAGATCTGAGCAGTCTTTGGTTCGATGGGTAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTTTGGAGGGGCTATACACTGTCAAGTCTCTTTCTAGGTTTGCTGATGTTGTTGCTCTTTCTGAGTTAGATTGA 648 0.4244 MWVGLIGCWNLQNNQFTGTIDVLANLPLENLLDIEKLDNQPFAPLTSNEVHEVKSVQTPSVVDMKTFDSSASINLKPPPIDLVRKNIKSANILLDAELNPHLSDSGLAGYIPNADQFLNHNSGSGYDAPEVALSDQYTLKSDVYSFGVVMLELLSGRKPFDSSRLRSEQSLVRWVTPQLHDIDALAKMVDPALEGLYTVKSLSRFADVVALSELD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0435 215 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 77 213 - -
Glsi12g0435 215 PANTHER OS01G0253100 PROTEIN 79 211 - -
Glsi12g0435 215 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0435 215 Pfam Protein kinase domain 86 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0435 215 SUPERFAMILY Protein kinase-like (PK-like) 85 181 IPR011009 -
Glsi12g0435 215 Gene3D Transferase(Phosphotransferase) domain 1 79 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0435 Glsi-ChrGlsi12 15090353 15094961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0435 33 79 Strubbelig Receptor Gene Family AT3G14350 54.000 7.42e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Glsi12g0435 Pkinase 7.2e-15 CL0016