Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0431 ATGCAGAGTTTAGATCCTCCTTATGCACATAATGATGTCAAACCTGGAAATGTTCTCATAACACATAGAAAAGGACAACCACCTCTTGCCATACTAATGGATTTTGGCAGTGCTTGGCCTGCCAAGAGGCAAATTCGCTCCCGATTAGAGGCACTACAGTTACAGGAATGGCCAGCTGAACATTGCTCTGCTCCTTTCCAAGCTATTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGATATTTGGTCACTAGGATGCACATTGTATATGCGATAA 291 0.4433 MQSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSAWPAKRQIRSRLEALQLQEWPAEHCSAPFQAIELWDCPSHADIDERTDIWSLGCTLYMR 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0431 96 SUPERFAMILY Protein kinase-like (PK-like) 2 95 IPR011009 -
Glsi12g0431 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 8 20 IPR008271 GO:0004672|GO:0006468
Glsi12g0431 96 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 95 - -
Glsi12g0431 96 Gene3D Transferase(Phosphotransferase) domain 1 2 95 - -
Glsi12g0431 96 Pfam Protein kinase domain 9 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0431 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0431 Glsi-ChrGlsi12 14521668 14522441 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Glsi12g0431 Pkinase 8.3e-09 CL0016