Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0430 ATGAAAATCATTGAGGTTTGCAGAGTAGAACCAGCCCATGAATCAGAGAACAACCAACCCACCCCAACCTTTCTTCCCCTCACCTTCTTTGACATATTATGGTTAAGGCTCCCTCCTGTTCAGCGCCTTTTCTTCTACGAATTCCCTCACCCAACCACAATCTTCTTCGATTCCCTTCTGCCAAAACTCACCCACTCTCTCTCTCTTGCACTTCGCTATTTCCTCCCTCTTTCTGGCCATCTAACTTGGCCCAATGATTCGGCTAAACCTGTCATCAAGTACGTAGAGGACGATGCAGTTTCCCTTACCATAGCTGAATCTAACGCCGATTTCGATCTTCTCTCAGGTTCTGATCTTTGGGAAGCATCAGAATGCCACCAACTGATACCCCACTTGACCACTTCCCATGAAAAAGCTTCTCTCTTAGCCTTGCAAGTCACTCTGTTTCCGAACTCTGGTTTTTGCGTTGGAATAGCTTCACATCATGCTGCTCTTGATGGGAAAACTTCTACTTCGTTTATGAAATCTTGGGCTTATCTTTGCAGAAGAATTGGGGAATCAGAATCACCATGCTCTTTGGCACCTGAGTTTATACCATTCTTTGACAGGGCTAAGATCAAAGACCCCTTTGAACTTGAGGCAAGATATGTGAGCGATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCCTCATGGTCTGGGATATTAATCCTCCGTCAGAGGCAATTAGAGGCAAATATGAACTGACACGCCCAGATATTGAAAAGCTCAAGCAATTGGTAGCTGCTAAGCGTAAAGGGAATGTTCACCTTCACTTGTCAACGTTCATGGTGTCTTGTGCCTATGCATGGGTTTGCATAGTGAGGGCAGAGGGAATGAAAGGAAACAATGTTCGTTTGGCTATGAATGTAGATTGTAGGCCTCGCTTAGAGCCTCCTCTTCCTCCAACTTATTTTGGAAATTGTATTGGAGCCCGCATAGCAGTTGCAGAGACGAGAGAATTATTAGGGGAAGATGGGCTAGTTGTGGCTGTGGAAGCCATTGCTGGAGCTTTGGAAACTTTGAAAGATGGGTTGCTAAGTGGAGCAGAAAACTGGGTGTCATTATTGCAGGGTGCTTTGGACCCTGATGATAGGATAATAGGCAGTGCTGGGTCGCCAAGATTTGAGGTTTATGGTACTGATTTTGGATGGGGAAGACCAAAGAAGGTGGAGATGGCTTCTATAGATAGGACAGGAGCAATTTGTCTGTCAGATAGCAGGAGTCGTAAGGGAGACGTTGAGATAGGTTTGGTGTTGAAGAAAAAAGTAATGGAGGCTTTCGCTTCTCTCTTTGTCAAAGGTCTTGAATCCCTCTAA 1359 0.4525 MKIIEVCRVEPAHESENNQPTPTFLPLTFFDILWLRLPPVQRLFFYEFPHPTTIFFDSLLPKLTHSLSLALRYFLPLSGHLTWPNDSAKPVIKYVEDDAVSLTIAESNADFDLLSGSDLWEASECHQLIPHLTTSHEKASLLALQVTLFPNSGFCVGIASHHAALDGKTSTSFMKSWAYLCRRIGESESPCSLAPEFIPFFDRAKIKDPFELEARYVSDWLKQGGPNNRSLMVWDINPPSEAIRGKYELTRPDIEKLKQLVAAKRKGNVHLHLSTFMVSCAYAWVCIVRAEGMKGNNVRLAMNVDCRPRLEPPLPPTYFGNCIGARIAVAETRELLGEDGLVVAVEAIAGALETLKDGLLSGAENWVSLLQGALDPDDRIIGSAGSPRFEVYGTDFGWGRPKKVEMASIDRTGAICLSDSRSRKGDVEIGLVLKKKVMEAFASLFVKGLESL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0430 452 Gene3D - 239 452 IPR023213 -
Glsi12g0430 452 Pfam Transferase family 4 443 - -
Glsi12g0430 452 PANTHER - 1 451 - -
Glsi12g0430 452 SUPERFAMILY CoA-dependent acyltransferases 271 451 - -
Glsi12g0430 452 Gene3D - 1 230 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0430 Glsi-ChrGlsi12 14515426 14516784 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0430 43 441 Monolignol Biosynthesis Gene Families AT5G48930 26.265 7.42e-26 107