Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0427 ATGCTAGTGAATTCAAATGGTTGGTTGAGGCATAGTTCACGAAGTTACAATCTTGCAGTTTGTGGGCCAGTTGGAGCTGCGAAATCTTCTCTCTTGTATGTTATTCTTGGAGAGATGCCAAACATCTCAGGAAACGTATCTACTTTGAATAATGATATAACTGGTTTTAGCCATGGTGATCTTACAGAAATAGGCCAGGGAGGCATTAACTTGAGTGGAGAACAGAAGCAGAGGATTCAACTTGCCCGAGCTCTCTATGATGATGCTGATGTATATATTCTTGATGATCCTTTCAGTGCAGTAGATGCACATATTGCTACAGTTTTGTTTCATGTAAGAAGAACACCTTACACTGTAAATGTAAGAGGCATATAA 375 0.3947 MLVNSNGWLRHSSRSYNLAVCGPVGAAKSSLLYVILGEMPNISGNVSTLNNDITGFSHGDLTEIGQGGINLSGEQKQRIQLARALYDDADVYILDDPFSAVDAHIATVLFHVRRTPYTVNVRGI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0427 124 Gene3D - 13 59 IPR027417 -
Glsi12g0427 124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 110 IPR027417 -
Glsi12g0427 124 Gene3D - 60 115 IPR027417 -
Glsi12g0427 124 Pfam ABC transporter 62 98 IPR003439 GO:0005524
Glsi12g0427 124 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 18 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0427 Glsi-ChrGlsi12 14272464 14273063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0427 43 104 Calmodulin-binding Proteins AT2G36910 38.710 5.86e-09 50.8