Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0419 ATGGGGAAAAGAGGGATCTTTGTTCGTGTGGTCCTTGTTCTGGTTCTTATCACACTCAGAGCAAGTCATGAACAAGTTAAAGCACAAGAAGATGGAGAAGAAGCCGATAGAATCTTTGAACTCCCAGGCCAACCAAAAGTCTCTTTCCAGCAGTTCTCTGGTTATGTCACTGTTAACCAAGCTGCTGGTAGAGCTCTCTTTTATTGGCTCACTGAAGCTGCCCAAAACCCTCTCTCTAAACCCCTCGTCATTTGGCTCAACGGAGGTCCGGGTTGCTCATCAGTGGCATATGGAGCATCCGAAGAGATTGGCCCATTCAGAATAAACAAGACAGCTTCAGGGCTGTACCTTAACAAGTTCACATGGAACACGGTGGCCAACCTCTTATTCTTGGAAGCTCCGGCCGGTGTTGGCTTCTCGTACACCAACCAATCCTCCGACATGTTCAATACTGGCGACAGTCGCACCGCCAAAGACTCGCTGGAATTCGTAATCCAGTGGCTGGATCGGTTCCCACGTTATAAAAATAGGGAACTTTATATCACTGGAGAGAGCTATGCAGGACACTATGTCCCTCAATTAGCTAAAGAAATCATGAGCTATAATTTAAAGGCCAAGAATCCCATCAATCTCAAAGGAATAATGGTTGGAAATGCAGTCACAGACAACTACTATGATAACTTAGGCACAGTGACATATTGGTGGAGCCATGCTATGATCTCCGATCAGACTTACAAGCAGCTCATCAGCACATGTGATTTTCACCAGATGAAGGAATCTGATGAGTGTGAGTCTTTATATAGTTATGCCATGGATAAAGAGTTTGGTAACATTGACCAATACAACATTTATGCACCTCCCTGCAACAACTCCGATGGTAGCTCCGCCACCCGCCACAATATGCGGTTGCCTCACCATCCTCATCGGATATTTAGGCAAATGTCTGGCTATGATCCTTGCACTGAAAAATATGCCGAGATTTACTATAACAGGCCAGATGTTCAGAAAGCTATCCATGCTAACAAAACAGGCATTCCCTACAAGTGGACAGCATGCAGTGAGGTTTTGAACCGAAACTGGCATGATACAGATGCATCTATTCTTCCCATTTATAGAGAGTTGATAGCTCATGGAGTCAGAGTTTGGGTTTTCAGCGGCGACGTCGACTCAGTGGTGCCGGTTACAGCGACAAGGTATTCCCTTGCACAGCTGAAGTTGGTAACCAAAGTCCCATGGTACCCTTGGTATGTTAAAAATCAGGTTGGAGGGTGGACTGAGGTGTATGAAGGGCTAACATTTGCCACCGTGAGAGGAGCAGGTCATGAAGTCCCACTGTTCAAGCCCAGAGCAGCCCTTCAGTTATTCAAATCATTTCTTGCAGGGAAGCCTCTTCCAAAGTCCTAA 1404 0.4594 MGKRGIFVRVVLVLVLITLRASHEQVKAQEDGEEADRIFELPGQPKVSFQQFSGYVTVNQAAGRALFYWLTEAAQNPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFTWNTVANLLFLEAPAGVGFSYTNQSSDMFNTGDSRTAKDSLEFVIQWLDRFPRYKNRELYITGESYAGHYVPQLAKEIMSYNLKAKNPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYKQLISTCDFHQMKESDECESLYSYAMDKEFGNIDQYNIYAPPCNNSDGSSATRHNMRLPHHPHRIFRQMSGYDPCTEKYAEIYYNRPDVQKAIHANKTGIPYKWTACSEVLNRNWHDTDASILPIYRELIAHGVRVWVFSGDVDSVVPVTATRYSLAQLKLVTKVPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0419 467 FunFam Carboxypeptidase 32 290 - -
Glsi12g0419 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Glsi12g0419 467 Gene3D alpha/beta hydrolase 32 290 IPR029058 -
Glsi12g0419 467 FunFam Carboxypeptidase 367 461 - -
Glsi12g0419 467 Gene3D - 367 461 - -
Glsi12g0419 467 Pfam Serine carboxypeptidase 43 460 IPR001563 GO:0004185|GO:0006508
Glsi12g0419 467 SUPERFAMILY alpha/beta-Hydrolases 40 465 IPR029058 -
Glsi12g0419 467 Gene3D - 320 357 - -
Glsi12g0419 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Glsi12g0419 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Glsi12g0419 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Glsi12g0419 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Glsi12g0419 467 FunFam Carboxypeptidase 316 464 - -
Glsi12g0419 467 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Glsi12g0419 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 448 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0419 Glsi-ChrGlsi12 14057242 14067367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0419 325 464 Calmodulin-binding Proteins AT2G22960 31.206 1.77e-15 72.8