Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0417 ATGGCCATAGAGGAGTCTGAGTCTGTGATTCCGGAGCTAGAAAGAGAGGAAAACTTAATTGCTGCAGCTAGACACATTGTGAAGGCATTAGGATCAAATAAGAACCTCACAAGTGATGCCAAAAAAATTCTGGCAGATCTTGGTACCCAATTGTCTTCCATCACCAAATCCAGTGAGACGGAGGAGGGGAAGGATGGGCAAGGAGGGGATGAGGAAGAGGAGGAGTGGGGAGTTAGTGCGATTGAAAGTCGGCTCAACGCCGTTCAGGAGAAAATAATGCGATGGGAGGAAGATCAGTCTATGATTTGGGATTCAAGGCCAGAAGAAATATCTGATTATCTGAATGCAGCAGATGAAGCTCGCCGATTGATTGCAAGGTTGGAGAGTTTGCATCTGAACAAAGAGGACCATGATTACAAGTTTTTGTTAATGGCTTATAGTGTTCTTCAGACAGCTATGGCACGGCTTGAAGAAGAGTTCAGGAACTTAATTATCCAGAACAGGCAGCCTTTTGAGCCTGAATATGTCTCTTTTCGATCCAGTGAAGAGGATGCCATTGATGAAAACTCTATAGTCTCTTTAGGGGATGAGTCAGTTGAAGAATCAGTCCAAAGAGACAGCATCAGCAGAGCCTCAGAGGAGCACATCATTGATTTAGTTCATCCAGATATGATCCCGGATATTAAGTGTATTGCAAACTTAATGTTTGCTTCAAATTACGACCAGGAATGTTCCCATGCCTATACCACTGTCCGAAGGGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGACTGAGCATTGAGGATGTTTTGAAAATGGAGTGGGGTACTCTAAACTCCAAAATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTTCGTGTGTATCTTGCAAGTGAGAAGTGGCTTGGTGACCAGATTTTTGGGGAGGGGGAAACAGTTAGTCTAACCTGTTTTGTTGATGCATCGAAGGCTTCAATGTTGCAGCTTCTAAATTTTGGTGAAGCCATGTCCATTGGCCCCCACCAACCTGAGAAATTAATTCGTATTCTTGACATGTACGAGGTTCTAGCCGATCTTATGCCAGACATAGATGCTTTGTATTCAGATGAGGTTGGTTCTTCTGTTCGAATTGAATGTCATGAGGTTCTAAAGAGATTAGGCGATTGTGTGAGGGTAACATTTCTTGAATTTGAAAATGCTATTGCAACAAATGCATCATCAACCCCTTTTGTAGGCGGTGGTGTTCATCCCTTGACCAGATATGTCATGAATTATATTAGGACTCTTGCTGACTACAGTGACACTCTTAATCTGCTTCTGAAGGACCGAGAGGAAGAGGATGCCATTTCGCTATCACCTGACATGAGCCCAGATACAGAAGAGGATAGCAAAATCCAGGGGTCACCACCTAGAGTATCCTCAATGGCCCTCCACTTTCGATCAGTTGCTTCAATCTTGGAATGCAACCTTGATGAGAAGTCCAAGTTATACAGGGAGGCTTCCTTGCAGCACTTGTTCTTAATGAACAATATACATTATATGGCTCAAAAGGTTAAGGGGTCTGAACTTAGGCTCATATATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAATTACGAAAGAGCTAGTTGGAGTTCCATTCTCTCCTTGCTTAAGGACGAGGGAATTCAAATTCCGGGTACAAATTCTATCTCAAAAAATCTTCTCAAGGAGAGATTACGGGTTTTCTACCTTGCCTTCGAGGATGTTTACAGGATCCAAACAGCTTGGATAATTCCAGATCCTCAGCTGCGTGAAGACTTACGGATCTCTATATCCCTCAAAGTAATTCAAGCTTACAGGACATTTGTAGGGAGGCATAATAGTCACATAAGTGACAAACACATTAAATACAATGCTGATGATTTAGGAAATTACCTTATGGATTTCTTTGAGGGATCTCCTAAATCATTGCCAAATCCCCACAGGAGATGA 2007 0.4255 MAIEESESVIPELEREENLIAAARHIVKALGSNKNLTSDAKKILADLGTQLSSITKSSETEEGKDGQGGDEEEEEWGVSAIESRLNAVQEKIMRWEEDQSMIWDSRPEEISDYLNAADEARRLIARLESLHLNKEDHDYKFLLMAYSVLQTAMARLEEEFRNLIIQNRQPFEPEYVSFRSSEEDAIDENSIVSLGDESVEESVQRDSISRASEEHIIDLVHPDMIPDIKCIANLMFASNYDQECSHAYTTVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASEKWLGDQIFGEGETVSLTCFVDASKASMLQLLNFGEAMSIGPHQPEKLIRILDMYEVLADLMPDIDALYSDEVGSSVRIECHEVLKRLGDCVRVTFLEFENAIATNASSTPFVGGGVHPLTRYVMNYIRTLADYSDTLNLLLKDREEEDAISLSPDMSPDTEEDSKIQGSPPRVSSMALHFRSVASILECNLDEKSKLYREASLQHLFLMNNIHYMAQKVKGSELRLIYGDEWIRKRNWKFQQHAMNYERASWSSILSLLKDEGIQIPGTNSISKNLLKERLRVFYLAFEDVYRIQTAWIIPDPQLREDLRISISLKVIQAYRTFVGRHNSHISDKHIKYNADDLGNYLMDFFEGSPKSLPNPHRR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0417 668 MobiDBLite consensus disorder prediction 453 474 - -
Glsi12g0417 668 MobiDBLite consensus disorder prediction 54 76 - -
Glsi12g0417 668 SUPERFAMILY Cullin repeat-like 97 656 IPR016159 -
Glsi12g0417 668 Coils Coil 78 98 - -
Glsi12g0417 668 Coils Coil 110 130 - -
Glsi12g0417 668 Coils Coil 146 166 - -
Glsi12g0417 668 Gene3D Exocyst complex component Exo70 91 664 - -
Glsi12g0417 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 78 657 IPR004140 GO:0000145|GO:0006887
Glsi12g0417 668 Pfam Exo70 exocyst complex subunit 286 651 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0417 Glsi-ChrGlsi12 14030096 14032102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0417 12 668 EXO70 exocyst subunit family AT3G29400 50.370 0.0 616