Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0375 ATGGAGTCAATTCAACACGATCTTAGCTTGCGATTGAAACAATCACATGTCCCCAAAAGCATAGGGAGGTTCCTGAATGATTTGAGAAAGTTAGATAGTGTGACTGACAAACTGTCAATGTTGGAAATCTATTTGCAAATGCTTAAGAAGGAGTATTCAAGGGTGGAACCATTTAGAACAGATCTCCCTCTATGCGTGCAACTCCTTGTAGATTCAATCGAACTTCTAAACGGGGAGATTGTGAAACTAGGCGAGTCTACGCCCACAAATGCTCTGATGAACTCATTGACATTTGAGGCCAATTACTACGCACAAAAACAGAAGCAAGTAGCAGCACATGACCAACCGAATAAGCATTTGAAATTTCAACCAGAAAATGGTATAGAGGATGGGTCTTCGATCACACCAAATGCAAAACTCCCAAGGATTGAACCGGTCAATGATGATTCTCTGAGCCATCAACCTCCAAAAATTTCAGAGCCAATTTGGAAGAACAATAGGAGATCCTGGTCCCCTGAACTTCATGCAATATTTGTGGAGGCCTTGAATTCTCTTGGTGGGCCTGAAGTGGCTAAGCCAAAGCAAATAAAGGAAGTTATGAAAATTGACGGACTTACCAATGACCAAATCAAGAGTCATCTACAGAAGTATAGGCTTCAAATGAAGGCATTTCCAGCAATGAATTCAAATGTGGGAGATGGAGGGTTCGAGACTACGTGTGGACAAGAAATGTTTTGCAGGGACCTTTGGATGCCATCCACTTCCTCTCCCTATCTTTCACCAAGTCAATTACAAGAAAGGGAAAATGCTGAAGTCTCTGCCATTTCTGGTTCCCAAATGCAAATTGTTGATCAATTTAGAAGCGGGTATGGCTTTGAACACTGCTTAAGCCAGGGTGACGGATCTCAGTCTGCCCACATGTATAGGAAATATATATGA 939 0.4196 MESIQHDLSLRLKQSHVPKSIGRFLNDLRKLDSVTDKLSMLEIYLQMLKKEYSRVEPFRTDLPLCVQLLVDSIELLNGEIVKLGESTPTNALMNSLTFEANYYAQKQKQVAAHDQPNKHLKFQPENGIEDGSSITPNAKLPRIEPVNDDSLSHQPPKISEPIWKNNRRSWSPELHAIFVEALNSLGGPEVAKPKQIKEVMKIDGLTNDQIKSHLQKYRLQMKAFPAMNSNVGDGGFETTCGQEMFCRDLWMPSTSSPYLSPSQLQERENAEVSAISGSQMQIVDQFRSGYGFEHCLSQGDGSQSAHMYRKYI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0375 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 222 IPR017930 -
Glsi12g0375 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 165 220 IPR006447 GO:0003677
Glsi12g0375 312 FunFam Two-component response regulator 163 224 - -
Glsi12g0375 312 MobiDBLite consensus disorder prediction 122 160 - -
Glsi12g0375 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 105 IPR044787 GO:0003700|GO:0006355
Glsi12g0375 312 Pfam Myb-like DNA-binding domain 167 218 IPR001005 -
Glsi12g0375 312 Gene3D - 165 222 - -
Glsi12g0375 312 SUPERFAMILY Homeodomain-like 163 222 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0375 Glsi-ChrGlsi12 12954603 12958234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0375 8 215 G2-like Transcription Factor Family AT4G37180 31.325 1.11e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi12g0375 Myb_DNA-binding 1.1e-06 CL0123