Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0358 ATGCGGATGAGCTGTAATGGATGCCGGGTATTAAGGAAAGGTTGCAGTGAGAATTGCAGTATCAGACCCTGCCTGCAGTGGATCAAAAGCCCAGAGTCTCAAGCCAATGCTACTGTGTTTCTTGCTAAGTTCTATGGTCGCGCTGGCCTCATGAACCTCATCAACTCTGGTCCTGAACACCTTCGTCCTGCGATTTTCCGTTCTTTGCTGTACGAGGCATGCGGACGGATAGTAAATCCGATTTATGGGTCCGTGGGTTTGTTGTGGTCCGGGAGCTGGCAGCTCTGTCAAGCCGCCGTGGAGGCCGTTTTGAAGGGGGCGCCGATCACGCCGATAACCTCCGAAGCAGCCACGAGTGGACGGGGCCCACCGCTGAAGGCTTATGATATACGCCACGTGTCCAAGGACGAGAACTCGGCTGCGTCTAACGATCCTCAACGAGTCAAGACCGGGTCGCGGTTCAAGCGCGCAGTTGTCAAACCGAAAGCCAACAAGGGACCCGGATTCGGGTCCGTTCAACCGGAAGCAGCACGTGACGCTAGCCCCATCAATGCCTGGACCGGGTGCTGCTCCACTGAGGAGGTGCTCAACCGGTCGGCAAGTCACGATTCCTCGCTGAGTCACCAGTCCGAGGCTGTGAACGTGGTTGATGGCGAGAGCAAAGAGGGCGAGAGCATGATTTCTGTGGAGACCGCCGAGACATCGATCCTCTTCCGAGACGAACCGGAATCGACCGAAAAGCACAGTGACGGAGCCGATGAGAGTGCCGATGTTGCTCTAGAGTTGACACTCGGGTTTGAACCGGCCTCACGTATGAATCACATGGTACCGGTGAAGAAGAGAAGGATCGAATTGAAGGATAATGAAAATGGGTCATGCAAGATGGAGCTGGGGCTTGAGTCCCAAGCTTGA 912 0.5537 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINSGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATSGRGPPLKAYDIRHVSKDENSAASNDPQRVKTGSRFKRAVVKPKANKGPGFGSVQPEAARDASPINAWTGCCSTEEVLNRSASHDSSLSHQSEAVNVVDGESKEGESMISVETAETSILFRDEPESTEKHSDGADESADVALELTLGFEPASRMNHMVPVKKRRIELKDNENGSCKMELGLESQA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0358 303 PIRSF AS2 1 303 IPR017414 -
Glsi12g0358 303 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Glsi12g0358 303 MobiDBLite consensus disorder prediction 135 177 - -
Glsi12g0358 303 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Glsi12g0358 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0358 Glsi-ChrGlsi12 11811557 11812555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0358 1 299 AS2 family AT3G02550 57.475 4.81e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi12g0358 LOB 1e-24 No_clan