Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0357 ATGGCTATGGTGGTCCTCACAACCCTTTTGCTCATACTTGGGACTCTGCTATTTAGAGTTGCGTATGACACCCTCTCATCCTACTGGCTCAACCCAAGACGCATCAAGAGAATCATGGAGAGGCAAGGCGTGCGTGGCCCCAAACCCCGCTTTCTCACCGGCAACATCTTAGACATGGCCAACCTTTTCTCCAGAGCCACCTCCCAAGACATGAAAACCATCAGTCACGACATTGTTGGCCGTCTTCTGCCGCATTTCGTTGCCTGGTCCAACCAATATGGAAAGAGGTTCTTATATTGGAACGGCACAGAGCCGAGATTGTGCTTAACAGAGACTGAATTGATCAAAGAGTTCTTGGCAAAGTACAGCACTGTGTCAGGGAAATCATGGCAGCAACAGCAAGGTTCGAAACATTTCATTGGGCGTGGACTGTTAATGGCGAATGGGGAAGATTGGTACCATCAACGTCACATCGTTGCCCCTGCATTTATGGGAGACAGGCTTAAGGGCTATGCTGGGCATATGGTGGAATGCACTAAGGAGATGCTCCAATCACTGCAAAATGCGTTTGAGTCAGGCCAAATTGAGGTGGAGATAGGTGAATACGTGACTAGGCTCACTGCTGATATAATCTCAAGGACTGAATTTGGTACAAGCTATGCGAAGGGAAAGCAAATATTCCATCTCCTGACTCTTCTTCAGAGTCGTTGTGCCCAAGCTAGTCGCCATCTCTGCTTTCCTGGAAGTCGGTTTTTTCCAAGTAAGTATAACAGAGAGATAAAGTCTTTGAAGATGGAGGTGGAGAGGCTATTGATGGAGATCATACAAAGCAGGAAAGATTGTGTGGAGATAGGTAGAAGCAATTCTTTTGGGAATGATTTATTGGGTATGCTTCTGAATGAGATGCAGAAGAAAAGAGGGAACGGTTTTAGCTTAAATCTGCAGCTAATTATGGATGAATGCAAGACGTTCTTCTTTGCTGGGCATGAAACTACTGCTCTCTTACTCACATGGACAGTCATGTTGCTAGCCGGCAATCAATCTTGGCAAGACAAGGTAAGAGCTGAGATTAAAGAGGTCTGCTATGGTGGAATTCCCTCTGTTGATCAACTCTCAAAGCTAACTGTGTTACATATGGTAATAAACGAGTCGATGAGGCTATATCCTCCAGCAACTGTGCTTCCAAGAATGGCCTTTGAAGACATCGTGCTCGGTGACCTTCACATCCCAAAAGGTGTATCAGTTTGGATCCCAGTTTTAGCTATTCATCACAGTGAAAAACTATGGGGTGAAGATGCAAATGAGTTCAACCCAAATAGGTTTGCTTCAAAGTCATTCACCCCTGGTCGTTTCATACCATTTGCTGCTGGACCTAGAAACTGTGTTGGACAAGCATTTGCTATGATGGAAGCTAAGATCATATTAGCCCTGTTAATCTCTCGCTTCAGCTTCACCCTTTCAGAGAGTTATCGTCATGCTCCCGTGGTTGTTCTCACAATCAAACCCAAATATGGAGTTCAAGTTTGTTTGAAGCCCCTAGATATTGTACAATGA 1554 0.4505 MAMVVLTTLLLILGTLLFRVAYDTLSSYWLNPRRIKRIMERQGVRGPKPRFLTGNILDMANLFSRATSQDMKTISHDIVGRLLPHFVAWSNQYGKRFLYWNGTEPRLCLTETELIKEFLAKYSTVSGKSWQQQQGSKHFIGRGLLMANGEDWYHQRHIVAPAFMGDRLKGYAGHMVECTKEMLQSLQNAFESGQIEVEIGEYVTRLTADIISRTEFGTSYAKGKQIFHLLTLLQSRCAQASRHLCFPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSNSFGNDLLGMLLNEMQKKRGNGFSLNLQLIMDECKTFFFAGHETTALLLTWTVMLLAGNQSWQDKVRAEIKEVCYGGIPSVDQLSKLTVLHMVINESMRLYPPATVLPRMAFEDIVLGDLHIPKGVSVWIPVLAIHHSEKLWGEDANEFNPNRFASKSFTPGRFIPFAAGPRNCVGQAFAMMEAKIILALLISRFSFTLSESYRHAPVVVLTIKPKYGVQVCLKPLDIVQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0357 517 Coils Coil 260 280 - -
Glsi12g0357 517 CDD CYP72_clan 83 507 - -
Glsi12g0357 517 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 Pfam Cytochrome P450 86 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0357 517 FunFam Cytochrome P450 734A1 29 514 - -
Glsi12g0357 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0357 Glsi-ChrGlsi12 11009476 11012722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0357 1 375 Cytochrome P450 AT5G38450 69.048 3.34e-176 499