Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0351 ATGCTAAACCCATTACTGCCTCCACTACATCTCTTAAGCTCTTTGGCATTAACATTCACAACCTTTCGGATGATCATGCATACCGATGCAGATTCAAGCAAATCTCCATCTGGGTCATCACTAGAATCCGAGCCTTTCAACTCCGCGGCCGATGCCCGGAAATACGAGTGCCAGTACTGTTGCCGTGAGTTCGCCAATTCACAAGCACTTGGAGGGCACCAAAACGCACACAAGAAAGAAAGGCAGATCCTAAAGCGTGCTCAAATGCAAGCTGCTCGTGGATTTGCTGCTTCACATATCCACAAACCAATCATATCAGGGTTCTCGCCACCACTTCACCTCCTTGCTGGAGCACTAGCGCCACCGCCTCAGTCATCTCCATATCTGCACACTTCACAGACAGCAGGTTACCCCCCAGCTTTGGTATATCATTCAGGGGCCTTTGCGGCGCAGGGAAGACGTGTCTGTGCCCCTGATTTTGGAGGATCTGTGGCAGTAGCTTTACCTGATTCACGAGCCCTACCTATGGCGAGATTCAGTGGCTTTACCAGAGGCGATGGTGGTGGGTGCCATAGCGAACAAAGCTTCGGTTTGGATTTGCATCTAAGTTTATAA 615 0.5008 MLNPLLPPLHLLSSLALTFTTFRMIMHTDADSSKSPSGSSLESEPFNSAADARKYECQYCCREFANSQALGGHQNAHKKERQILKRAQMQAARGFAASHIHKPIISGFSPPLHLLAGALAPPPQSSPYLHTSQTAGYPPALVYHSGAFAAQGRRVCAPDFGGSVAVALPDSRALPMARFSGFTRGDGGGCHSEQSFGLDLHLSL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0351 204 Gene3D Classic Zinc Finger 39 102 - -
Glsi12g0351 204 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Glsi12g0351 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Glsi12g0351 204 PANTHER ZINC FINGER PROTEIN 5 30 204 IPR044299 GO:0010090
Glsi12g0351 204 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0351 Glsi-ChrGlsi12 9787457 9788071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0351 53 204 C2H2 Transcription Factor Family AT1G68360 41.954 1.78e-30 110