Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0344 ATGTCGTTACCGTCGAACTGGACACTCTCCGGTTGCCTCAACACTGTACGGATCTCTCCGCAACACCTCCTACCCCTTCACCGGCGGCGAACGCCCCAGTCCCGTTTGAGCTGCCCAGTGACGATTTTCCCGAGTTGGACATATAGTCGGCCCACAAACGCATTCATCATAAAGCTAGACAATCTGTTCGAATGTGAGATTAATGTGAACCCAATCGATTCTTATTCTTTGGTTAGTCCTGTTCCAGTGGGCCCCATTCTTGGTAAAACATCTAGTTCAGGACCTGTAGTAGGTAACCTCAATTCTGTTGGCATATGGAGCATTGCAGTAGGAATTGCAGCTGTTGTTGGAATCCTTCTTGGATGTTGGTTGTACTTTATTGTACAGAGAAGAAAAAGAATTGCTAAACAGTTGAAAAGCGAGAATATTTCCATACCTCCTTCAAGCAAAGGCGCTCTTACCTCTACCACTAATATGTCTCAAAGTGCCCCTCCTTACCCCTCCTCCAAGTTTGACTCTGTGCAGAGGAGAAACCTCAAGGATGGACGCGTTGTTGCAGTGAAACGCCATTATGAAAGCAATTTTAAACGTGTTGAGCAGTTCTTGAATGAAGTTGAGATTTTAGCTCGCTTACGGCATAACAACCTCGTGGCACTCTATGGATGCACATCTAGACATAGCCGAGAGCTTCTCCTTGTTTATGAATACATTCCTAATGGGACAGTGGCTGACCATCTCCATGGTGTAAGAATGAATTCACTTGACTTGGATCAGGACTTGAATGATTTAGTTAACTCGGTTGGTATGGTGGCAACTGCTGAAACTGCCTTATCTAGAGCGGACCGAAGATATTTAAGAAAAACAGTGAACCCCACATGTGTAGAACCAGAGAGGGCTGTTTGTACTTCTCTAGGATGCATTTTTCCACATAAGATGGTGAACTTTTACGCCATCTTATTCAAAACATCTCTTGTCCTTGCTTCCGGACAGGAATCAACGTATACTGAATAA 1011 0.4451 MSLPSNWTLSGCLNTVRISPQHLLPLHRRRTPQSRLSCPVTIFPSWTYSRPTNAFIIKLDNLFECEINVNPIDSYSLVSPVPVGPILGKTSSSGPVVGNLNSVGIWSIAVGIAAVVGILLGCWLYFIVQRRKRIAKQLKSENISIPPSSKGALTSTTNMSQSAPPYPSSKFDSVQRRNLKDGRVVAVKRHYESNFKRVEQFLNEVEILARLRHNNLVALYGCTSRHSRELLLVYEYIPNGTVADHLHGVRMNSLDLDQDLNDLVNSVGMVATAETALSRADRRYLRKTVNPTCVEPERAVCTSLGCIFPHKMVNFYAILFKTSLVLASGQESTYTE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0344 336 Pfam Protein tyrosine and serine/threonine kinase 180 259 IPR001245 GO:0004672|GO:0006468
Glsi12g0344 336 MobiDBLite consensus disorder prediction 149 172 - -
Glsi12g0344 336 SUPERFAMILY Protein kinase-like (PK-like) 171 256 IPR011009 -
Glsi12g0344 336 Gene3D Phosphorylase Kinase; domain 1 168 237 - -
Glsi12g0344 336 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 92 256 IPR044652 GO:0004672
Glsi12g0344 336 ProSiteProfiles Protein kinase domain profile. 160 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0344 Glsi-ChrGlsi12 9540955 9545774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0344 108 248 Receptor kinase-like Gene Family AT1G25390 44.516 1.90e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi12g0344 PK_Tyr_Ser-Thr 1.5e-10 CL0016