Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0311 ATGCAGGGCAACCACAGCGCTATCAGACGGTCTCCCTATAAAAGAATTTTATCCGACTACCTCCCGCCCGCTGCGTCGCCTCAAACTGAAGCTAGGGTTCATCTCAACGCCGAGGCGCTCAGTCTGTTCACTATTTGATTGACCAACATGTATACGTCGAGGAAGAAAATCCACAAAGATAAGGATGCCGAGCCCTCTGAATTTGAGGAGACAGTTGCACAGTACCTATTTGACTTAGAGAACACTAATCAAGAGCTAAAAAGTGACCTGAAAGATCTCTACATAAATCAAGCAGTTCAAATGGATGTTTCTGGGAATCGCAAGGCTGTGGTTATCTATGTGCCTTACAGATTGAGGAAGGCATTCCGCAAAATTCATCTTCGCCTTGTCAGAGAGTTGGAGAAAAAATTTAGTGGCAAGGATGTTGTCTTGGTTGCCACAAGAAGGATTGTGCGGCCTCCAAAGAAAGGCTCTGCTGTCCAGCGACCTCGCTCTCGGACATTAACCGCCGTCCATGATGCCATGCTGGAGGATGTTGTGCATCCTGCTGAAATTGTTGGCAAACGTGCCAGATATCGCATTGATGGGTCAAAAATAATCAAGGTTTACTTGGACCCTAAAGAGCGAAATAACACTGAATACAAGCTGGAGACTTTTTCTGGGGTTTACAGGAAGCTTACTGGGAAAGATGTAGTATTTGAGTATCCAATCACCGAAGCTTGA 723 0.4564 MQGNHSAIRRSPYKRILSDYLPPAASPQTEARVHLNAEALSLFTIXLTNMYTSRKKIHKDKDAEPSEFEETVAQYLFDLENTNQELKSDLKDLYINQAVQMDVSGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVHPAEIVGKRARYRIDGSKIIKVYLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPITEA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0311 240 Coils Coil 76 96 - -
Glsi12g0311 240 PANTHER 40S RIBOSOMAL PROTEIN S7 50 239 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi12g0311 240 Pfam Ribosomal protein S7e 56 235 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi12g0311 240 ProSitePatterns Ribosomal protein S7e signature. 128 141 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0311 Glsi-ChrGlsi12 8553374 8556720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0311 50 240 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.675 1.37e-116 329