Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0248 ATGGGTAAGCATGTAGTGGTGAGATCGGTTTCAACCTTGAGGGATCCATGGCCTCTAAAATGGAGTGCGACATTTCAACTGATGATACTCCTCCATCGTCGTACGCACAAGCCAAAGAATATATACAAAGATCCTGATGATGGTCGGCAGCGATTTTTACTTGAATTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATACACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTGAAGTATCTTCAATATTGGCAGCGACCTGAATATATTAAATATATTATGTATCCTCATTGCCTCTTCTTCCTTGAACTTCTTCAGAATGCGAATTTTCGCAATGCAATGGCACATCCTGGTAACAAAGAATTGGCACATAGACAACAATTCTACTTCTGGAAGAATTATAGGAACAATCGGCTAAAACACATTTTGCCAAGGTCACTTCCTGAATCTAGTGCCACGCCTGCACCCCCTGCTCCTGCCTTAATTCCATCTCAGCAACCTGTGCCTGCTCTGCCACCGGTGCCAGCTACAAATGTTCCTGTGACTTCATCATCTGCTCAAGCTCCTTCTCCAATGCCATATAGTATGCCATCTGCCTCTGCTCTTGCAAAGAATGATATGAGGAATCCTGCAATTGATCGGAGGAAGAGAAAGTAA 681 0.4258 MGKHVVVRSVSTLRDPWPLKWSATFQLMILLHRRTHKPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKYIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPESSATPAPPAPALIPSQQPVPALPPVPATNVPVTSSSAQAPSPMPYSMPSASALAKNDMRNPAIDRRKRK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0248 226 MobiDBLite consensus disorder prediction 185 202 - -
Glsi12g0248 226 MobiDBLite consensus disorder prediction 158 184 - -
Glsi12g0248 226 MobiDBLite consensus disorder prediction 155 226 - -
Glsi12g0248 226 Pfam SOH1 50 142 IPR008831 GO:0003712|GO:0006355|GO:0016592
Glsi12g0248 226 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 37 139 IPR038089 -
Glsi12g0248 226 FunFam Mediator of RNA polymerase II transcription subunit 31 38 139 - -
Glsi12g0248 226 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 39 226 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Glsi12g0248 Med31 5.5e-35 No_clan