Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0239 ATGACTATCGGAAATATTGTACCCAAGACAGAGAAGAAAAAATCACGAAGGAGCAAAGCAGTTGTTCATGAGGATGCGCCCTTGTTACCTAAAACACGGGAGGTTGATGTTGGATTTGACGATTTTAATGGGGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGGATCATGGCGTTGCCTGCAACCTTGAGAGAGTTGGGAATGGTGCCTGGGATTCTTGTTATCATCTTCATGGCTTTCTTAACAGAGAAGTCAATTGAGCTGTTGGTCAGGTTTACCCGGGAAGGGAACTGTGGTTCTTATGGAGGTCTAATGGGGGATTCCTACGGGAATTATGGGAAAGCTCTGGTGCAGATATGTGTTATAGTCAACAACATTGGGGTTCTCATTGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCATCAAGTGGAGATCACCATGCGGGTATCCTTGAAGGATGGTTTGGTGTCCACTGGTGGACTGGGCGTACATTTGTTCTTCTTTTTACAACACTGGCTATATTTGCACCTCTGGCAAGCTTTAAGCGGATTGATTCATTGAGATTCACGTCAGCCCTATCAGTTGGACTGGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCAATTATGAAGATTATAAGTGGAGGTGTTGGGATGCCCAGACTCTTGCCCATCATTACTGATTTTACTTCATTTTTTAAACTGTTCACTGTAGTTCCTGTGCTTGTGACTGCCTATATCTGCCACTACAACGTTCACAGCATAAATAATGAACTTGAAGATCCCACTCAGATGCAAGGGGTTGTACGTACTGCCCTTGCTTTATGCTCTTCAGTGTACTTAATGACAAGCTTCTTTGGGTTCCTTCTATTCGGTGAAGGAACACTTGATGATGTGCTTGCCAACTTTGATACTGATCTGGGAATTCCTTTGGGTTCTGTGCTCAATGATGCCGTACGTTTTAGCTATGCTGCACATCTCATGCTTGTATTTCCAGTTGTCTTTTATCCACTGCGGCTCAACGTAGATGGTCTCGTCTTTTCCTCATCAAGACCGTTGGTTTTGGATAACTTCAGATTTGTGTCAATGACTATTGCCCTCATCAGTCTTATCTTTCTGGGAGCAAATTTCATTCCCAGTATTTGGGATGCATTCCAGTTCACTGGAGCAACAGCTGCAGTTTGTTTAGGATTTATATTTCCAGCTGCCATCACTCTTAGGGATCGGTACAACATAGCAACCAAAACGGACAAGATTTTCTCTATCCTTATGATTGTCCTGGCACTCTTCTCAAATCTTGTGGCTATTTACAGTGATGCCTATGCCTTGGTAAAGAAGAACCAAACTTCACGTGAATGA 1392 0.4267 MTIGNIVPKTEKKKSRRSKAVVHEDAPLLPKTREVDVGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMVPGILVIIFMAFLTEKSIELLVRFTREGNCGSYGGLMGDSYGNYGKALVQICVIVNNIGVLIVYMIIIGDVLSGTSSSGDHHAGILEGWFGVHWWTGRTFVLLFTTLAIFAPLASFKRIDSLRFTSALSVGLAVVFLVIAVGISIMKIISGGVGMPRLLPIITDFTSFFKLFTVVPVLVTAYICHYNVHSINNELEDPTQMQGVVRTALALCSSVYLMTSFFGFLLFGEGTLDDVLANFDTDLGIPLGSVLNDAVRFSYAAHLMLVFPVVFYPLRLNVDGLVFSSSRPLVLDNFRFVSMTIALISLIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLRDRYNIATKTDKIFSILMIVLALFSNLVAIYSDAYALVKKNQTSRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0239 463 PANTHER AMINO ACID TRANSPORTER 44 441 - -
Glsi12g0239 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0239 Glsi-ChrGlsi12 6259539 6262998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0239 3 463 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.414 0.0 644