Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0224 ATGGTCGATTGGAATGAATATGAGTATCAATTCATTGAAAAGATTGTGAAAGAGATCTGTAATAAGATCAACAGGACTCCTTTGCATATTGCTAACTATCCAGTTGGATTGGAGTCTCGAGTGCAGGAGGTAAACTCTCTTTTAGAAGTTGGGTCAAGTGACAAAGTCCTCATGGTAGGGATACGTGGAATTGGGGGAATGGGTAAATCAACAATTGCACGGGCTGTATATAACTCAATTGCGGATCAATTTGATGCTTTATGCTTTCTCCATGATATCAAAGAAAAGTCAAGTAAAATTGGTCTAGAAAAAATTCAAGAAGAAATGCTTTCCAAGGCTGTAGGAATGGACAGCAAGATATTGGAGAATTTGAGTATTTTGAATCTCAAGGGATCCCAACTTATAACACATATACCTGATATATCTAGCATCCCAAATTTAATTGTATTAAGGCTTGATTTTTGTGAGAACTTAATTGAAATTCACAATTCTGTCGGATATATGGGAAAACTTGAAATTTTGAGTGCTGTTAGTTGTGCCAAGTTGAGGACTTTTCCACGTTGCATCAGGTTGCCCTCTCTCCGTGATCTCCATCTTCAGCGGTGCATTAGTCTTGAGAAATTTCCGGAAGTACTGGAAAAGATGGAACATATAACAGAACTTCGTTTGGATGGGACGAACTTAGAGTTGCCCCATTCAATTGTTAATCTTACTAGACTTCAACTGTTAGAGATGGTTTATTGCGAAAAAAAGGCTCCATCGCAAGAACTAGAAAGCACATTTAGTGAAGGTTGTGAAGAGTTGCAATCAGCTGATCAGGACAAAGTCAAAGAAGAATTGTGCTCCATGCAGTATTCCAGAGCAACATATATTGATCTACATCGAAGCAATATATCAAATGAGCTCCTTTCAACATATCTTACTTGGTTTACCAATGTGGAAGATTTAGACCTATCATTTAATGATTTCACGATTCTTCCAGCATGCATCGAAGACTGTTACAATTTGAGTTATCTTAATCTAGATAATTGCAAGCATCTGAGTGAAATTAGGGGGATTCCGCTAAACATAATGCGATTGCAAGAAAAAAACTGCACATCATTGAGTTCAGAGTCTAAAAGCATGTTGCTGAGCCAGATAGTTGGCAATATGCAATTACATTTTCGTCATGTTTCTTTTGCGATGGCCGCTTATGCTTAAAAACACCTTTATTTCCTTCATGTTGGTGTTACCCAAAACTTATACTTTGAGAACCTTATCAGTGAGATTATACATCACAATAAAAAAGGAAAAAGCCTTGCTGTACGGGAGCCAAATGAATACATCAAGCTGGATGTGCTGGCATATTTGAGAATCGCCTGGCGCCTTGTTAAAACCAAGGCAGTTAACGGAGATACAGCTGTGATCTAG 1410 0.3794 MVDWNEYEYQFIEKIVKEICNKINRTPLHIANYPVGLESRVQEVNSLLEVGSSDKVLMVGIRGIGGMGKSTIARAVYNSIADQFDALCFLHDIKEKSSKIGLEKIQEEMLSKAVGMDSKILENLSILNLKGSQLITHIPDISSIPNLIVLRLDFCENLIEIHNSVGYMGKLEILSAVSCAKLRTFPRCIRLPSLRDLHLQRCISLEKFPEVLEKMEHITELRLDGTNLELPHSIVNLTRLQLLEMVYCEKKAPSQELESTFSEGCEELQSADQDKVKEELCSMQYSRATYIDLHRSNISNELLSTYLTWFTNVEDLDLSFNDFTILPACIEDCYNLSYLNLDNCKHLSEIRGIPLNIMRLQEKNCTSLSSESKSMLLSQIVGNMQLHFRHVSFAMAAYAXKHLYFLHVGVTQNLYFENLISEIIHHNKKGKSLAVREPNEYIKLDVLAYLRIAWRLVKTKAVNGDTAVI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0224 469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 114 IPR044974 GO:0006952
Glsi12g0224 469 Pfam NB-ARC domain 41 109 IPR002182 GO:0043531
Glsi12g0224 469 Gene3D Ribonuclease Inhibitor 189 258 IPR032675 -
Glsi12g0224 469 Gene3D Ribonuclease Inhibitor 259 376 IPR032675 -
Glsi12g0224 469 PRINTS Disease resistance protein signature 58 73 - -
Glsi12g0224 469 PRINTS Disease resistance protein signature 331 347 - -
Glsi12g0224 469 SUPERFAMILY L domain-like 117 376 - -
Glsi12g0224 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 123 IPR027417 -
Glsi12g0224 469 Gene3D - 13 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0224 Glsi-ChrGlsi12 5917471 5925806 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0224 121 316 WRKY Transcription Factor Family AT4G12020 30.392 2.29e-09 58.2