Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0209 ATGGTAAAAGCAACATTTAGGCGAATTGTGGCACCCTGTTGGAGACCATCTGTTGAGGGTGAGAATTCTAATAAGAATGGGGATGCAAATGGTCGTGTAAATGGTTTACTGTGGTATAAAGATTCTGGAAAACATGTGAATGGTGAATTCTCGATGGCTGTCATTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCTCAATGAGCTCACTTGAAGCGGGTCCTCAAGGCACTTTTGTGGGGATATATGATGGCCATGGAGGTCCTGAGGCTTCCCGGTTCGTAAATGACCACCTATTTAAAAATATAAAGAAATTTACCTCAGAGAATCAGGGAATGTCAGCCGATGTTATTAATAAAGCCTTTTTGGAAACAGAAGAGGAGTTCCTTTCTCTAGTGAGGAAGCAGTGGCTAAATAAGCCACAAATAGCTTCTGTTGGATCATGCTGCTTGATAGGCATAATATGCAGCGGGGTGCTCTACATTGCCAATGCAGGAGATTCTCGGGTGGTGTTAGGTAGACTGGAAAAGACTGATAAGGAGATTAGAGCAATTCAATTATCCTCTGAGCACAATGCTAGCTCGGAATCTGTCAGAGACGAGTTGCGCTCTTTGCATCCTCATGATCCCCAGATTGTGGTTTTGAAGCACAGGGTCTGGCGTGTGAAGGGTATAATTCAGGTTTCAAGATCCATTGGAGATGCCTATCTAAAGAGGGCAGAGTTTAATAAAGCACCTCTTTTGTCAAAATTTAGAGTCTCAGAACCCTTTGAGAAGCCGATCCTTAACGCGGAACCAACAATATCAGTGCAAAATCTTCATCCTCACGATCAATTCCTTATATTTGCATCAGATGGGTTATGGGAGCACTTGAGCAATCAGGAAGCAGTTGAAATTGTCCAGAACTGTCCACGTAATGGAATAGCAAGGAAACTAATCAAGACTGCACTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAGATTGATAGAGGGGTTAGAAGACATTTCCATGACGACATCACAGTTATAGTTTTATATCTTGATTCACATCTAATCAGCCGCAGTACTTGGCATGGGCCCTTGCTTTCAGTCAGAGGAGGTGGTGGTATTGGTATCGGAGATACATAA 1158 0.424 MVKATFRRIVAPCWRPSVEGENSNKNGDANGRVNGLLWYKDSGKHVNGEFSMAVIQANNLLEDQSQLESGSMSSLEAGPQGTFVGIYDGHGGPEASRFVNDHLFKNIKKFTSENQGMSADVINKAFLETEEEFLSLVRKQWLNKPQIASVGSCCLIGIICSGVLYIANAGDSRVVLGRLEKTDKEIRAIQLSSEHNASSESVRDELRSLHPHDPQIVVLKHRVWRVKGIIQVSRSIGDAYLKRAEFNKAPLLSKFRVSEPFEKPILNAEPTISVQNLHPHDQFLIFASDGLWEHLSNQEAVEIVQNCPRNGIARKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDSHLISRSTWHGPLLSVRGGGGIGIGDT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0209 385 CDD PP2Cc 50 357 IPR001932 -
Glsi12g0209 385 PANTHER PROTEIN PHOSPHATASE 36 355 IPR015655 GO:0004722|GO:0006470
Glsi12g0209 385 SMART PP2C_4 41 355 IPR001932 -
Glsi12g0209 385 SUPERFAMILY PP2C-like 78 358 IPR036457 -
Glsi12g0209 385 FunFam Phosphatase 2C family protein 38 367 - -
Glsi12g0209 385 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Glsi12g0209 385 Pfam Protein phosphatase 2C 72 324 IPR001932 -
Glsi12g0209 385 Gene3D - 31 366 IPR036457 -
Glsi12g0209 385 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0209 Glsi-ChrGlsi12 5536766 5541459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0209 4 381 PP2C-type Phosphatase Gene Family AT3G12620 78.892 0.0 621