Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0127 ATGAAATATGAGGGAATGGACGGCTATTTTAGGCCTTCCATTTTGGGCCTCAAGATAATGTTAAAACTCAAGGTTTGGTTCGCAGAAAATAAGTTAGGAAGAGGCGCCGCTGCAAAGCTCGGGGACACAGCAATGGCGAGGATCAAGGTTCACGAGCTCAGGCAGAAATCGAAGTCTGAGCTACTCAACCAGCTCAAGGATCTCAAGGCTGAGCTTGCTTTGCTTCGTGTTGCTAAGGTCACTGGCGGTGCTGCCAACAAGCTCTCCAAGATAAAGGTGGTGAGATTGTCCATTGCCCAGGTGTTGACGGTGATTTCTCAGAAGCAGAAGGCTGTATTGAGGGAAGCTTATAAGAACAAGAAATACTTGCCTCTTGATCTGCGCCCCAAGAAGACCAGGGCTATTCGCAGAAGGCTTACCAAGCACCAGGCATCATTGAAGACAGAACGAGAGAAGAAGAAAGAGACATACTTCCCTATGAGGAAATATGCTATTAAGGCTTAG 504 0.4722 MKYEGMDGYFRPSILGLKIMLKLKVWFAENKLGRGAAAKLGDTAMARIKVHELRQKSKSELLNQLKDLKAELALLRVAKVTGGAANKLSKIKVVRLSIAQVLTVISQKQKAVLREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKETYFPMRKYAIKA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0127 167 Gene3D - 122 167 - -
Glsi12g0127 167 SUPERFAMILY Ribosomal protein L29 (L29p) 48 109 IPR036049 GO:0003735|GO:0005840|GO:0006412
Glsi12g0127 167 NCBIfam 50S ribosomal protein L29 52 108 IPR001854 GO:0003735|GO:0005840|GO:0006412
Glsi12g0127 167 PANTHER 60S RIBOSOMAL PROTEIN L35 45 167 IPR045059 GO:0000463|GO:0022625
Glsi12g0127 167 FunFam 60S ribosomal protein L35 45 121 - -
Glsi12g0127 167 CDD Ribosomal_L29_HIP 52 108 - -
Glsi12g0127 167 Hamap 50S ribosomal protein L29 [rpmC]. 48 108 IPR001854 GO:0003735|GO:0005840|GO:0006412
Glsi12g0127 167 FunFam 60S ribosomal protein L35 122 167 - -
Glsi12g0127 167 Coils Coil 58 78 - -
Glsi12g0127 167 Gene3D - 45 121 IPR036049 GO:0003735|GO:0005840|GO:0006412
Glsi12g0127 167 Pfam Ribosomal L29 protein 52 108 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0127 Glsi-ChrGlsi12 3009114 3010729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0127 45 166 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 90.164 4.46e-72 211