Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0118 ATGGTGGGTAAGGACGATGCTCGAGCTCCGTGCCAACTTTCCGGCTCCCCGAAATTGTTCTGGCGGTCGGCTTCTTGGTCGTCTTCCCGTTCCACCGCCCACAACGGGGACAGCGAGGAGAAGGATTTTGCAAATCCAGATGGCAATATTGTTAATATTAACAGGCAAAATCGTAGGTATCATGCCCCGTTAACTCCTCGATCACAGCAGAATTGTAAGTCTCGCTCTTGTTTGCCGCCGTTGCAGCCACTGTCGATTGCTAGGAGGAGCTTGGATGAGTGGCCGAAGGCGGGTTCGGATGATATTGGCGAGTGGCCACAACCTCCGACCCCTAGCGGAAGAGGAAACGGGGAGAGGTTGAAGCTTGATTTGTCGTCGATTCAGCGAAACCCAGATAAAAATGGTGGGTTTGTGAAGAGAGATAAGATTGCTTTCTTTGATAAAGAATGCTCAAAAGTTGCCGAACATATATATCTTGGTGGGGACGCGGTTGCTAGAGATAGGGATATATTGAAACAAAACGGGATTACCCATATTCTGAACTGCGTGGGTTTTGTTTGTCCTGAGTACTTCAAAGCCGATTTTGTATATAGAACATTGTGGTTGCAGGATAGTCCATCGGAAGATATTACTAGCATTCTGTATGATGTCTTTGACTATTTTGAAGATGTTAGGGAGCAAGTAGGAAGGGTGTTTGTGCACTGTTGCCAAGGGGTGTCACGGTCCACATCTCTGGTGATTGCATACCTTATGTGGAGGGAAGGGCAAAGTTTTGATGATGCTTTTCAGTATGTCAAGGCAGCAAGAGATATTGCCGATCCAAATATGGGCTTTGCCTGCCAATTGTTACAATGCCAAAAAAGGGTCCATGCATTCCCGCTTAGTCCAAGCTCTTTGCTGAGAATTTATAGGATTGCTCCACACTCACCCTACGATCCTTTGCACCTTGTCCCCAAAATGTTGATTGATCCTTCTCCATCTGCCCTGGACTCCAGAGGTGCATTTATAGTACATATACCTTCTGCAATATATGTTTGGATAGGTAAGAATTGTGAGGCCATCATGGAAAGGGATGCCAGAGGGGCTGTGGGCCAGATTGTTTGCTATGAGAGAGTGCAAGGCCCAATTTTTATGATCAAGGAAGGTGAGGAACCAGCTTACTTTTGGGATGCTTTTTCTAATTTTTTGCCTTTGATGGATAAGTCTGGCTATCAAATAGAAAATAGCAAATCAAGTGTTAAAATTTGTCCTGGTGAGCGGAAAGTAGACTCATACAATATTGATTTTGAAGTTTTCCAGAAAGCCATCATAGGGGGTTTTGTGCCTCCGTTTGCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCTAGAGAGAGCAGTTGGAGTGTGTTAAGGAGAAAATTTACCTGTACGAATATGAAGGAATTTGTGTCAGTGCCGAAATTATCCTTTTCAAGGGTTTATTCAGATTCTATTTTGTGTATTCATTCATCTGCAAATTCATCTCCATTGTCATCGCAGTCATCATCATCTTCACCCCCTTATCTATCTCCAGATTCTATTTCATCTGATTCAAGCACCAATTCAAAGTGTTTCTCAGAATCGTCCCTGGATTCCCCTTCTGCAACTTCTACTTCTGTTCCAGCATCTTTATCTTTGTCTAACTTTTCTAACTTGTCCCTCCTTTCATCGAATTGTACTTCTCATCAGGTATCTAACAGTGCAGAAATTTATGGTGTTAAGTTGACATCAGGACCTTGTTGTCAGTCAACTTCTTCAACATTGAAAAAACCTTCAACTTCCCTTGCTGAACGCAGAGGTAGCTTGTCAAAGTCTTTGAAATTACCCCTAACAAATGATAAGACACAGGTTATAAATAGACCATCAACATTCTATGCCAGTGGAAAAGATGGTTTTCTGGTGAACAGCAAGCATGTTGAAGATAGAGGGTTGAGTTCAATTCAACAGTCTGAGGTGCCATGTCCAATCCCTGTGGATAGTGTGGACTACAAGCAACCCTCATTTGTCAGAAACTGTGGTGAACCTTCAGTATTTATTTCCTCAAGAAAAGACCTAAAGTCTACTTCAAATGAGGTTCACAAAGGTGGTTCATCACAATGTAATATGACACAAACTTTAGTATACAACTGGCCCAGTTTAGAGAAGATTGTAACATTTAGTGAAAGTCATCTGGATTCTAAATCTGCTTTAGCTATTTTCTCTCCAAGTACGGGATTAGGTGAACATGCTGGAAACCTTTTATACTTTTGGGTTGGGAGATCTTTCAACTGTGATGCATCTCAGGTTTGGTTAGATAGTGATAGAGAGTCAGATTATCTAAGAGCAGTTGATTGGAATCAAATTGGATGTTATGTCCTTGCTCAATTAAGTTTGCCAAAGGACACAATAATTAAGATTGTTAGAGAGAATGAAGAACCAGATGATTTCCTTGCTTTACTGAGTACATTGCGGTTTAAGTACTAA 2487 0.4206 MVGKDDARAPCQLSGSPKLFWRSASWSSSRSTAHNGDSEEKDFANPDGNIVNINRQNRRYHAPLTPRSQQNCKSRSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSSIQRNPDKNGGFVKRDKIAFFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQVGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARDIADPNMGFACQLLQCQKRVHAFPLSPSSLLRIYRIAPHSPYDPLHLVPKMLIDPSPSALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAVGQIVCYERVQGPIFMIKEGEEPAYFWDAFSNFLPLMDKSGYQIENSKSSVKICPGERKVDSYNIDFEVFQKAIIGGFVPPFASSEDEHETHLPARESSWSVLRRKFTCTNMKEFVSVPKLSFSRVYSDSILCIHSSANSSPLSSQSSSSSPPYLSPDSISSDSSTNSKCFSESSLDSPSATSTSVPASLSLSNFSNLSLLSSNCTSHQVSNSAEIYGVKLTSGPCCQSTSSTLKKPSTSLAERRGSLSKSLKLPLTNDKTQVINRPSTFYASGKDGFLVNSKHVEDRGLSSIQQSEVPCPIPVDSVDYKQPSFVRNCGEPSVFISSRKDLKSTSNEVHKGGSSQCNMTQTLVYNWPSLEKIVTFSESHLDSKSALAIFSPSTGLGEHAGNLLYFWVGRSFNCDASQVWLDSDRESDYLRAVDWNQIGCYVLAQLSLPKDTIIKIVRENEEPDDFLALLSTLRFKY 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0118 828 MobiDBLite consensus disorder prediction 501 523 - -
Glsi12g0118 828 PANTHER MKPA PROTEIN 10 821 - -
Glsi12g0118 828 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 218 269 IPR000387 GO:0016311|GO:0016791
Glsi12g0118 828 MobiDBLite consensus disorder prediction 586 609 - -
Glsi12g0118 828 ProSiteProfiles Dual specificity protein phosphatase domain profile. 149 291 IPR020422 GO:0006470|GO:0008138
Glsi12g0118 828 MobiDBLite consensus disorder prediction 23 79 - -
Glsi12g0118 828 ProSitePatterns Tyrosine specific protein phosphatases active site. 233 243 IPR016130 GO:0016311|GO:0016791
Glsi12g0118 828 MobiDBLite consensus disorder prediction 97 117 - -
Glsi12g0118 828 SMART dsp_5 149 288 IPR020422 GO:0006470|GO:0008138
Glsi12g0118 828 Pfam Dual specificity phosphatase, catalytic domain 157 287 IPR000340 GO:0008138|GO:0016311
Glsi12g0118 828 Gene3D Severin 312 396 IPR029006 -
Glsi12g0118 828 SUPERFAMILY Actin depolymerizing proteins 297 398 - -
Glsi12g0118 828 Gene3D Protein tyrosine phosphatase superfamily 138 291 IPR029021 -
Glsi12g0118 828 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 143 290 IPR029021 -
Glsi12g0118 828 MobiDBLite consensus disorder prediction 49 78 - -
Glsi12g0118 828 CDD DSP 150 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0118 Glsi-ChrGlsi12 2645655 2650711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0118 1 185 Protein tyrosine phosphatase (PTP) family AT3G55270 63.158 2.14e-68 240