Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0080 ATGGAGGGGCTCAAGAAGGCGTTCGGAGCAGGTTCTCCGGCAATGGTGCTGCTGCTTGTAATGTGCGCTGTGCTTTTCATATTGCCTGAGGCCTCAGCTACTCGGTGGACGGTAGGAGGCAACACGTTTTGGACCACCAATGTTAACTACACTAAATGGGCTCAGGGAAAGCACTTCTACAATGATGACTGGCTCTTTTTTGTGTATGATAGGAACCAAATGAATGTGCTTGAGGTGAACAAGACAAACTACGAAACATGCAATTCTGATCATCCACTCCACAATTGGACAACTGGGGCTGGAAGAGACGTGGTTCCACTGAATGTTACTCGCCATTACTATTTCATTAGTGGAAATGGGTTCTGCTATGGTGGCATGAAGCTAGCTGTTCGTGTTGAAAACCCACCACCTCCACCAGTAGCTGCTCCAATTAAAGATGGAGCACCACCAACTCTGTCCTCCAAAGGCCAAATCGTTCTGTTGCCAGTTGTTTTTGCTATTGGAGCAGCATGGGATGCATTCATTCACTTCTGGTAA 537 0.473 MEGLKKAFGAGSPAMVLLLVMCAVLFILPEASATRWTVGGNTFWTTNVNYTKWAQGKHFYNDDWLFFVYDRNQMNVLEVNKTNYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGNGFCYGGMKLAVRVENPPPPPVAAPIKDGAPPTLSSKGQIVLLPVVFAIGAAWDAFIHFW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0080 178 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Glsi12g0080 178 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
Glsi12g0080 178 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
Glsi12g0080 178 PANTHER BLUE COPPER PROTEIN 34 139 IPR039391 GO:0009055
Glsi12g0080 178 FunFam Lamin-like protein 32 135 - -
Glsi12g0080 178 Gene3D - 32 135 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0080 Glsi-ChrGlsi12 1981004 1983100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0080 14 178 Phytocyanin Superfamily AT5G15350 53.614 1.18e-62 189