Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0042 ATGAGGTTTGGATCATCCACCATTCCCATCCTGCTCCTCCTCTCTTTGGCCTCTCATCCTTCTTTCTCTTTCTCTCTCTCTCTCCTCGCCGTCGACTTCGAGTCAGAGGTGCTCCTCGAGGAAGCCAATGCAACCACTACTTCCAATGGGTCGCTTGCCAGATCCAATGAGGATAGCTTTGCTAACATGATTGATCGGGCTCTGGAGAGGGAATTCCCCGAGAATGAGCAGAATGAAGGTGGTGATACTGGTAGTTTCAACAATAGTGTTGCTGAACAGCAGGCTGTTTTAGAAACTGTTGCAAGAGTTAAGCCCAAGAAAAATGAGAGCAAAGAGGAAAAGTCTTTTCAGTTTCATGATGTTTTCAATTTGGAGAATGAGAACCGGGCAGAAGATATGCCAACCTTAATTGATCGAAAGGACAATGTCTTTATAATATCCAATCCCAAGTCAAAGTATCCTGTTCTTCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAGCCTGTGGTGGCATTGCATTTGCTTGTGCTGGACAACCGGTTATCGCTGGATATCTGCTAGCAGGGTCAGTCATTGGACCAGGAGGCTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTACTTTTTGCATTGGGCCTGGAGTTTTCCTCAACAAAGCTTCGTATTGTCCGAGCAGTGGCTATTCTTGGTGGTCTGCTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACTGCCTCGTTATGTGGTGGTAAATCTTCTGAGGGAATATTTGTTGGTGCATTCCTATCTATGTCTTCAACAGCAGTGGTCTTGAAATTCTTAATGGAAAGAAATAGTGCCAATGCCCTTCATGGCCAGGTTATTATTGGAACTCTTATTCTGCAGGATTGTGCTGTTGGTTTGCTATTTGCGCTGCTTCCAGTCTTGGGTGGTACATCAGGAGTTCTTCAGGGAGTAATGTCGATGACTAAATTGTTGGTGGTTTTAATTTCATTTTTGGCCATTTTGTCCATTGTATCTCGTACCTGTGTACCGTGGTTCCTTAAGCTTATGATAAGCTTATCATCTCAGACCAATGAACTTTATCAATTGGCATCAGTTGCATTCTGCCTACTGGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGCCTTGAACTGGGTTCATTTGCTGCGGGAGTGATGATATCAACGACAGATCTTGGTCAACATACCCTTGAACAAGTTGAACCAATTCGCAACCTTTTTGCTGCTTTGTTCTTGGCCAGCATTGGGATGCTTATACATGTTCATTTCCTTTGGAATCATGTGGACATCTTACTGGCAGCTGTTATACTGGTGATCATTATAAAAACTATTGTGGGTGCAGCAGTTGTCAAGGGATTTGGATACAACAAAAAGACTTCGCTTCTTGTTGGGATGTCTCTGGCACAAATTGGGGAATTTGCCTTTGTCCTTCTTGGTCGTGCTTCAAACCTTCATTTAGTTGAGGGAAAGTTATATTTATTGCTCCTTGGAACAACAGCTCTCAGCTTGGTGACTACCCCATTGCTTTTCAAGCTAATTCCTGCTGTTTTGCATCTGGGTGCATTGTTGCGGTGGTTCCCTCCTGATAGTCCAGCTGAGCTTGCATTTAAAGGGGATAGCTTTCGTTCAGACAGTGGCAGGCGAATTACTTTGATGGTTCAAGGCTCTCATAATTCATGA 1755 0.4325 MRFGSSTIPILLLLSLASHPSFSFSLSLLAVDFESEVLLEEANATTTSNGSLARSNEDSFANMIDRALEREFPENEQNEGGDTGSFNNSVAEQQAVLETVARVKPKKNESKEEKSFQFHDVFNLENENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSAACGGIAFACAGQPVIAGYLLAGSVIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSSTKLRIVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSANALHGQVIIGTLILQDCAVGLLFALLPVLGGTSGVLQGVMSMTKLLVVLISFLAILSIVSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNLFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVGAAVVKGFGYNKKTSLLVGMSLAQIGEFAFVLLGRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVLHLGALLRWFPPDSPAELAFKGDSFRSDSGRRITLMVQGSHNS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0042 584 Gene3D - 160 543 IPR038770 -
Glsi12g0042 584 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 42 560 IPR045158 GO:0015386|GO:0071805|GO:1902600
Glsi12g0042 584 Pfam Sodium/hydrogen exchanger family 167 536 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0042 Glsi-ChrGlsi12 1145333 1158275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0042 32 584 Antiporters AT2G19600 81.720 0.0 882