Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0022 ATGGGCCCTTTTCTCAGGAAATCAATCTCTTGCACTCTAATCACAGTGGCTCTTATTTCAATCACAAAGTTTTTATATTCCTCCTTCTCTGTACCTTTCCCCTCATCCTTTCTCTCAATTGCTGCACTCATCTTTTTTACTCTGATCCTATACTTTTTCCCCTCAGTTTCTTCCACCACTCTTCCTCCAGGCCCTGTCTCTGTCCCTATCTTTGGGAACTGGCTGCAAGTTGGAAATGACCTAAACCACCGTCTTCTAGCTTCCATGTCACAAACCTATGGCCCTTTATTCTTACTCAAACTTGGTTCCAAGAACTTGGTGGTGGTCTCTGACCCTGAGCTTGCTACCCAAGTCCTTCACTCACAAGGGGTCGAATTTGGCTCTCGCCCCCGAAACGTTGTGTTCGATATCTTCACTGGAAATGGCCAAGACATGGTGTTCACAGTGTATGGTGATCACTGGCGCAAAATGCGTAGGGTGATGACATTGCCATTTTTCACCAACAAAGTCGTCCACCATTACAGTACCATGTGGGAAGAAGAGATGAACATGGTTGTGAGCGACCTCAACGGTAACGAGACGGTGAGAAGCAAAGGGATAGTGATCAGAAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCACAAGAGGACCCCTTATTCATCGAGGCAACTAAATTCAACTCTGAGAGAAGCCGTTTGGCTCAGAGTTTTGAGTATAACTACGGAGACTTTATACCTTTGCTCAGACCATTTTTGAAGGGCTACCTGAATAAGTGCAGGGACCTGCAAAACAGGAGGCTGGCTTTTTTCAACAATTACTATGTTGAACAAAGAAGAAAAATAATGGCGGCTAATGGGGAGAAGCACAAGATAAGCTGCGCAATTGACCACATCATAGATGCTCAGATGAAGGGAGAAATCAGTGAAGAGAATGTGCTTTACATTTTAGGAGGGTATACCATTCCAAAAGAGTCTAAGGTGGTAGTGAATGCTTGGTGGCTAGCCAACAACCCAACATGGTGGAAAAACCCAGAAGAGTTTAGGCCAGAAAGGTTCTTGGATGAGGAATGCGGGACAGATGCAGTGGCAGGTGGGAAGGTAGATTTTAGGTACTTACCGTTTGGAGTTGGTAGGAGGAGTTGCCCTGGGATCATACTTGCATTACCAATACTGGGTCTAGTGATTGCAAAATTGGTGTCAAATTTTCAGATGAAAGCACCAGAAGGGACAAAGGTAGATGTCACTGAAAAAGGAGGACAATTCAGCTTGCACATTGCCAAACATTCAACAGTCCTGTTCCATCCAATTAGGGCATGA 1350 0.4467 MGPFLRKSISCTLITVALISITKFLYSSFSVPFPSSFLSIAALIFFTLILYFFPSVSSTTLPPGPVSVPIFGNWLQVGNDLNHRLLASMSQTYGPLFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRVMTLPFFTNKVVHHYSTMWEEEMNMVVSDLNGNETVRSKGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATKFNSERSRLAQSFEYNYGDFIPLLRPFLKGYLNKCRDLQNRRLAFFNNYYVEQRRKIMAANGEKHKISCAIDHIIDAQMKGEISEENVLYILGGYTIPKESKVVVNAWWLANNPTWWKNPEEFRPERFLDEECGTDAVAGGKVDFRYLPFGVGRRSCPGIILALPILGLVIAKLVSNFQMKAPEGTKVDVTEKGGQFSLHIAKHSTVLFHPIRA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0022 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Glsi12g0022 449 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 PRINTS E-class P450 group I signature 341 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 45 327 - -
Glsi12g0022 449 Pfam Cytochrome P450 327 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 Pfam Cytochrome P450 62 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 Gene3D Cytochrome P450 324 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 Gene3D Cytochrome P450 56 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0022 449 SUPERFAMILY Cytochrome P450 62 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0022 Glsi-ChrGlsi12 603286 605345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0022 327 446 Monolignol Biosynthesis Gene Families AT2G30490 64.463 5.33e-48 170