Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3405 ATGGGGGATGGTTGTGATGCCCTGAAAATCAGAAACATATGTATTATGGCACACGTTGATCATGGCAAGACTACACTAGCTGATCATTTGATTGCCGCTTCTGGGGGAGGTCTACTTCACCCCAAGTTGGCTGGACGAATTAGGTTTATGGATTATCTCGATGAGGAGCAAAGAAGGGCAATCACTATGAAGAGCTCTTCTATTGCACTTCACTATAAGGACTACTCAATTAACCTTATAGATTCCCCGGGTCATATAGACTTCTGTAGTGAGGTTTCCACAGCTGCTAGATTAAGTGATGGTGCCTTGATATTGGTTGATGCTGTTGAAGGTGTGCATATTCAAACCCATGCTGTGTTGCGGCAATGTTGGATTGAAAAGCTCTCGCCATGCTTGGTTCTTAACAAGATTGATAGGTTGATTAGTGAATTGAAGCTGAGTCCCATGGAAGCCTATACTCGTTTGTTAAGAATTGTCCATGAGGTTAATGGGATAGTCAGTACATATAAGTCTGAGAAGTATTTGTCGGATGTAGATTCCATACTTGCAAGCTCTTCAGGTGTCGCAATTGGTGATGAAAACAGTGAGCTCATAGAGGATGATGATGAAGATATGTTTCAACCACAGAAAGGGAATGTGGCATTTGTGTGTGGGTTGGATGGCTGGGGATTTGGAATTCACAAGTTTGCTGAATTTTATGCTTCAAAACTTGGGGCTAGTGTTTCTGCATTGCAGAAAGCCTTGTGGGGTCCTCGGTATTTCAATCCAAAGACCAAAATGATAGTTGGGAAGAAAGGCATAGGTGGAGGAAGTAAGGCTAGGCCAATGTTTGTCCAGTTTGTGCTTGAACCGCTATGGCAGGTATACCAGGGAGCTATGGATGCTGATGGGGACAAAGGAATGCTTGAGAAAGTCATTAAGTCATTTAATTTGTCTGTACCGTCTCGTGAACTTCAAAATAAGGACCCCAAATTTGTACTGCAAGCTGTTATGAGTCGCTGGCTTCCTCTGTCAGACGCAATCTTATCAATGGTGGTCAAGTGTATGCCAGACCCAATAGCAGCACAATCATTTCGTATCTCACGTCTTCTTCCAATGAGAGAGGTTCTTGATGATGAGGTTGAACAGAATGTGCTTGTAGAAGCAGAGCTTGTGAGAAAATCAGTAGGGTCCTGTGATTTGAGGCCTGAAGCTCCATGTGTTGCTTTTGTGTCAAAGATGTTTGCTGTCCCAGTTAAAATGCTTCCCCAAAGGGGTCCACATGGAGAGATCATGAACTACTGTGGTGATGAAGGAGAAGGTGAGTCAGACGAGTGTTTCTTGGCTTTTACTAGGATCTTTAGTGGAGTTTTAACTGCAGGACAGAGAGTTTTTGTGCTTTCAGCTTTGTATGATCCACTAAAAGGGGAATCAATGCAAAAGCATGTGCAGAAGGCTGAATTGCAATCCTTGTATCTAATGATGGGCCAAGGGTTGGAAGTAGTGACATCTGCAAAAGCAGGAAATATTGTTGCTATCCGAGGACTGGGACAACATATACTGAAAAGTGCTACTCTTTCATCCACTAGGAATTGTTGGCCTTTCTCTAGTATGGCTTTCCAGATAGCTCCAACTCTCAGAGTTGCAATTGAGCCATCTGACCCTGCAGATATTGGTGCACTATTGAAAGGCTTGAGGCTTCTAAATCGAGCAGACCCATTTGTTGAGATCACTGTTTCTGCAAGAGGAGAGCATGTTTTAGCTGCAGCAGGCGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAGAGATTTGCAAAGGTGAGTTTGGAAGTCTCTCCACCTCTTGTGTCCTACAAAGAGACCATTGAAGGAGAAGAGTCTGACATGCTGGAAAATTTGAAAGCTCTTACTAAGAGTTCAGATTATGTTGAAAAAACAACACCAAATGGAAGATGTGTTGTTCGTGTGCATGTGATGAAACTTCCATCTTCTCTAACAAAGGTGCTTGATGATAGTTCTGATTTACTTGGAGATGCCATTGGATTAAAGTTAGGGCAGACTGTTAAAAGCTTGGATACCCAGAGATCAAGTATTTTAGAAAATGATAGTCCATCTGAAGTGCTAAAAAAACATATAATGGATGCAGTGGAAAGTGAGATCTTGAGCAGGAATGAGAATGACAAGGACCGTGTTGACAAATGTAAGGTGATGTGGCTAAATCTTTTGAGGAAGATGTGGGCACTTGGACCAGGGCAAATTGGTCCCAACGTTCTCTTGACTCCTGATGTTAAAGTTGAAAATCCTGATAGCTCTGTTCTAATATGTGGTTGCTCTCATGTATCTGAAAGGTTGGGTTTTATGGATGATTGTAATACAGTAGCTGAGACATATTCAAATGTGAACCAAATGTTAAAGATGGAGGCCGAGCATCTTGAGAGTAGCGTTATATCTGGGTTCCAACTGGCCACTGCAGCCGGACCCTTATGTGATGAACCTATGTGGGGTTTGGCGTTTGTCATTGAGGCACATATTTCTCCATTTACAGGGCAATATGATGAATCTAATTCATACCAACAATCTGAGCTGTATGGCGTCTTTGCAGGACAGGTAATTACAACTGTCAAAGATGCTTGTAGAGCAGCTATGCTTCAGAATAAGCCACGGCTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACTCCTACTGAATATTTGGGTCCCATGTATGCTGTACTTGCCCGAAGACGGGCCCGAATTTTGAAGGAAGAGATGCAGGAAGGTTCCGCTTTCTTCACCGTGCATGCATACGTGCCTGTCTCTGAAAGCTTTGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGTGCTGCTAGTGCACTTCTTGTCTTTAGTCACTGGGAAGCACTTTCTGAGGATCCTTTCTTTGTACCTAAAACAGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTGCTTCCTAATACAGCAAGAAAGCTAATTGATGCCGTCAGACGTCGCAAGGGCCTTCCTGTGGAGGAAAAAGTAGTACAGCATGGCTCAAAGCAGAGGACACTAGCACGCAAAGTCTGA 3078 0.4298 MGDGCDALKIRNICIMAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALHYKDYSINLIDSPGHIDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYTRLLRIVHEVNGIVSTYKSEKYLSDVDSILASSSGVAIGDENSELIEDDDEDMFQPQKGNVAFVCGLDGWGFGIHKFAEFYASKLGASVSALQKALWGPRYFNPKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGAMDADGDKGMLEKVIKSFNLSVPSRELQNKDPKFVLQAVMSRWLPLSDAILSMVVKCMPDPIAAQSFRISRLLPMREVLDDEVEQNVLVEAELVRKSVGSCDLRPEAPCVAFVSKMFAVPVKMLPQRGPHGEIMNYCGDEGEGESDECFLAFTRIFSGVLTAGQRVFVLSALYDPLKGESMQKHVQKAELQSLYLMMGQGLEVVTSAKAGNIVAIRGLGQHILKSATLSSTRNCWPFSSMAFQIAPTLRVAIEPSDPADIGALLKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVSYKETIEGEESDMLENLKALTKSSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDLLGDAIGLKLGQTVKSLDTQRSSILENDSPSEVLKKHIMDAVESEILSRNENDKDRVDKCKVMWLNLLRKMWALGPGQIGPNVLLTPDVKVENPDSSVLICGCSHVSERLGFMDDCNTVAETYSNVNQMLKMEAEHLESSVISGFQLATAAGPLCDEPMWGLAFVIEAHISPFTGQYDESNSYQQSELYGVFAGQVITTVKDACRAAMLQNKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARILKEEMQEGSAFFTVHAYVPVSESFGFADELRRWTSGAASALLVFSHWEALSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGSKQRTLARKV 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3405 1025 CDD EF2 11 234 - -
Glsi11g3405 1025 Gene3D - 6 208 IPR027417 -
Glsi11g3405 1025 FunFam Elongation factor 2-like protein 2 214 - -
Glsi11g3405 1025 Pfam Elongation factor G C-terminus 884 968 IPR000640 -
Glsi11g3405 1025 FunFam Elongation factor like GTPase 1 226 335 - -
Glsi11g3405 1025 Gene3D - 882 1016 - -
Glsi11g3405 1025 NCBIfam small GTP-binding protein domain 9 140 IPR005225 GO:0005525
Glsi11g3405 1025 CDD EF2_snRNP_III 537 608 - -
Glsi11g3405 1025 SUPERFAMILY EF-G C-terminal domain-like 886 984 IPR035647 -
Glsi11g3405 1025 FunFam Elongation factor Tu family protein 352 534 - -
Glsi11g3405 1025 CDD EF2_II 399 522 - -
Glsi11g3405 1025 CDD aeEF2_snRNP_like_IV 608 890 - -
Glsi11g3405 1025 SUPERFAMILY Translation proteins 392 531 IPR009000 -
Glsi11g3405 1025 SUPERFAMILY EF-G C-terminal domain-like 535 609 IPR035647 -
Glsi11g3405 1025 Pfam Elongation factor Tu GTP binding domain 9 346 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 241 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 CDD eEF2_snRNP_like_C 886 964 - -
Glsi11g3405 1025 Gene3D - 632 880 IPR014721 -
Glsi11g3405 1025 Gene3D Translation factors 352 534 - -
Glsi11g3405 1025 Pfam Elongation factor Tu domain 2 441 519 IPR004161 GO:0005525
Glsi11g3405 1025 SMART EFG_C_a 883 972 IPR000640 -
Glsi11g3405 1025 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Glsi11g3405 1025 FunFam Elongation factor like GTPase 1 882 1017 - -
Glsi11g3405 1025 Gene3D Elongation Factor G (Translational Gtpase), domain 3 537 612 - -
Glsi11g3405 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 350 IPR027417 -
Glsi11g3405 1025 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Glsi11g3405 1025 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 9 1024 - -
Glsi11g3405 1025 FunFam Translation elongation factor 2 536 612 - -
Glsi11g3405 1025 SUPERFAMILY Ribosomal protein S5 domain 2-like 611 885 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3405 Glsi-ChrGlsi11 55946874 55949951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3405 3 1025 Eukaryotic Initiation Factors Gene Family AT3G22980 72.639 0.0 1520