Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi11g3362 | ATGTTGGCTACAGCGGCTTTTTCCCCTGGCTACGCCTTCCCTTTGGCCACCGGTAGAGCAGTCCAATTCAATTCAACCAATCCTTCTCCTCTAAAGCTCATAGCATCTCTACAAGACCACCCGCTTGCAAGCAAAATTGTGGTTAAAAATTTACCATATTCTGCTGGTGAGGCTAGTCTTCAGAAGAAATTTTCAAATTTTGGCGAGATAGCTGAAGTTAAAGTGGTTAAAGATACCACAAAAAGATCTAAGGGATATGCTTTTATTCAATACACTAGTCAAGGTGATGCCATGCTTGCATTAGAAACCATGGATCAAAAGGTATTTGATGGCCGGATGATTTATGTAGAACTTGCAAAACCTGGGAGAGATGATTTTGGTGGACGCCCAAAGACCTCAGGGCCCCCAAAGAAGTGGCATTTGCCAGTACAAGAGGAGGTGGTGGATTGCTGGTACTGA | 459 | 0.4379 | MLATAAFSPGYAFPLATGRAVQFNSTNPSPLKLIASLQDHPLASKIVVKNLPYSAGEASLQKKFSNFGEIAEVKVVKDTTKRSKGYAFIQYTSQGDAMLALETMDQKVFDGRMIYVELAKPGRDDFGGRPKTSGPPKKWHLPVQEEVVDCWY | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi11g3362 | 152 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 44 | 121 | IPR000504 | GO:0003723 | |
Glsi11g3362 | 152 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 46 | 114 | IPR000504 | GO:0003723 | |
Glsi11g3362 | 152 | CDD | RRM_SF | 46 | 117 | - | - | |
Glsi11g3362 | 152 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 41 | 131 | - | - | |
Glsi11g3362 | 152 | SMART | rrm1_1 | 45 | 117 | IPR000504 | GO:0003723 | |
Glsi11g3362 | 152 | SUPERFAMILY | RNA-binding domain, RBD | 44 | 131 | IPR035979 | GO:0003676 | |
Glsi11g3362 | 152 | Gene3D | - | 35 | 139 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi11g3362 | Glsi-ChrGlsi11 | 53926655 | 53930270 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi11g3362 | 43 | 124 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 30.488 | 1.75e-07 | 47.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi11g3362 | 11 | 53926655 | 53930270 | Glsi11g3362 | 11 | 53926655 | 53930270 | ECH |