Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3353 ATGCTCTCCACTCTTCATTTGTATAATAATAATATCTCTGGAGCAATTCCATCAGAGATCACACAGCTTGCCAGTATTATTAGCATTGAATTAAGATCTTTTGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGATGTGAATGAGAAATGTGATGTTTATAGTTTTGGAGTTTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATTTTATTTTTCTCGTCAAACTCTTCTATGGCAACAGCATTGTCAGAAGCCCATAATTTGCCATTGAAGGATGTGTTGGACAAAAGGCTTCCTTATCCTTTGAACTCAGTTGCTGAGGAGGTGATCTTGATTGCAAAAATAGGATTTGCTTGCTTAAATGAAAGTCCACATGCTCGCCCAACCATGGAGAAAGTATGTAAGGAGCTCGTCACGCCGAAATCACCTCTTTTAGTTCCATTCAACAATATCATACTAGGAGATCTATACCGAAAAGAATACTGA 501 0.3812 MLSTLHLYNNNISGAIPSEITQLASIISIELRSFGYAAPELAYTMDVNEKCDVYSFGVLALEIIMGKHPRDLIILFFSSNSSMATALSEAHNLPLKDVLDKRLPYPLNSVAEEVILIAKIGFACLNESPHARPTMEKVCKELVTPKSPLLVPFNNIILGDLYRKEY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3353 166 SUPERFAMILY Protein kinase-like (PK-like) 29 145 IPR011009 -
Glsi11g3353 166 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g3353 166 Gene3D Transferase(Phosphotransferase) domain 1 13 144 - -
Glsi11g3353 166 PANTHER LEUCINE RICH REPEAT KINASE 2 33 147 - -
Glsi11g3353 166 Pfam Protein tyrosine and serine/threonine kinase 35 142 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3353 Glsi-ChrGlsi11 53455790 53459265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3353 33 145 Receptor kinase-like Gene Family AT1G75820 41.667 1.21e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi11g3353 PK_Tyr_Ser-Thr 6.6e-08 CL0016