Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3349 ATGGGAAGAAGTATCGCGGGGTTCGGCAGCGGCAGTGGGGGCGGTTCGCGGCGGAGATCAGAGATCCGGTGCGGCGGGAGAGAGTGGCTGGGTACCTTCGACACGGCGGAGGAAGCTGCTTTGGTTTATGACAGAGCAGCTATTCGTCTCCGAGGTTCTGATGCTATGACAAATTTCCTCAAACCACCCGAGAAAGCCCAGGAATTCGAAGATACCCAGAAGAAAAATAATGGGTTGAAAGGGTTTTCGGAGAGTGATTGTGTTTCGAATTGTGGGTATGATTCAGGTAAAGAGACACACGGTTCATCTTCACCGACGTCTGTTCTTAGGCTTCAGGAACCCATGAAAGAGTGCAGAGAAGAACCAATTTTACAAGAAGATAGCTTTTTGTTTCTAGATTCTTCTCCATCTGTTAGTCCTTATTCAGATTCTGAAATCCCTCCTCCAATGTTCTTCGAAGAATCCAGTGTACCCCAATTCATTGGCAATGACAATTTCAGAGACATTCCCTTTCACCTCGATCAAGATTTTGAATCTTGTAAATGGGGCGTAGACAATTACTTTCAAGAGCCTTTGCAGCTGCAATGA 588 0.466 MGRSIAGFGSGSGGGSRRRSEIRCGGREWLGTFDTAEEAALVYDRAAIRLRGSDAMTNFLKPPEKAQEFEDTQKKNNGLKGFSESDCVSNCGYDSGKETHGSSSPTSVLRLQEPMKECREEPILQEDSFLFLDSSPSVSPYSDSEIPPPMFFEESSVPQFIGNDNFRDIPFHLDQDFESCKWGVDNYFQEPLQLQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3349 195 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g3349 195 ProSiteProfiles AP2/ERF domain profile. 4 60 IPR001471 GO:0003700|GO:0006355
Glsi11g3349 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 116 - -
Glsi11g3349 195 SUPERFAMILY DNA-binding domain 17 59 IPR016177 GO:0003677
Glsi11g3349 195 CDD AP2 21 59 IPR001471 GO:0003700|GO:0006355
Glsi11g3349 195 Gene3D AP2/ERF domain 15 61 IPR036955 GO:0003700|GO:0006355
Glsi11g3349 195 SMART rav1_2 4 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3349 Glsi-ChrGlsi11 53184598 53189026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3349 27 192 AP2-EREBP Transcription Factor Family AT2G46310 38.889 3.11e-21 87.0