Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3347 ATGGTGAGAGACATGACGGCCACTTACTCAGCATCAGCAGGGTGTGGTGGGGGAGACATGAATGTGAAACCTGCATGGCTAGAGAGGCTGATGGCTGAGACATTCTTTGGTGGGTGTGGGGTCCACGAGAATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCCCACCGCTCACACCCTCTCCTCCAGGTGAGAAGGTATGTTTACCACGACGTCGTTCGATTGGGTGATCTGGAAAAACTTATTGATTGTTCCAATATTCAGCCGTATACTATTAACGGTGCCAAGGTGATATTCTTAAATCAGAGGCCACAGTCAAGATCATGCAAAGGCTCTGCCAACGTTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCATTCCACTTCTGTTCTCTCTCATGCAAGGTTGATCACATGGTCTATGAAGGTGAAAACTTGTCCAGCATTTTACATCGATTCGATGAATCTGATTTTGCATTTTCGCAATTCGAGGGTCTACGAGTGGATGGTTCAGAGGTCATCGACGAAGATGCCCAAATTGCCCCTCCCTCTGCCTTAGAGGACTTGAGAGCTTCTTCTTGCTCCAATACTGAAGCCACCAGCAATTCCGTAATTTCAAGCGAACCCAAGAAGAAGAAGACCAATAGCTTCCTCCCTGGGATTGTCCTATCTCTTGGCAGCAGGAGAAAGGGAGCTCCTCAAAGAGCTCCTCTATCTTAG 759 0.4862 MVRDMTATYSASAGCGGGDMNVKPAWLERLMAETFFGGCGVHENRRKNEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVIFLNQRPQSRSCKGSANVCCTCDRILQEPFHFCSLSCKVDHMVYEGENLSSILHRFDESDFAFSQFEGLRVDGSEVIDEDAQIAPPSALEDLRASSCSNTEATSNSVISSEPKKKKTNSFLPGIVLSLGSRRKGAPQRAPLS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3347 252 Pfam PLATZ transcription factor 78 149 IPR006734 -
Glsi11g3347 252 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Glsi11g3347 252 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 22 251 - -
Glsi11g3347 252 MobiDBLite consensus disorder prediction 203 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3347 Glsi-ChrGlsi11 53076994 53080733 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi11g3347 PLATZ 5e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g3347 11 53076994 53080733 Glsi11g3347 11 53076994 53080733 ECH