LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g3334	ATGGTAGAGACCCTCCTCCTTCATAAATGTCACCCCTCCTCCAAGACTGAACACCGCTCTATCCGCCATCGTTCTAGCTATCGCAATCTAGGTAGATATTCTCGTGTAGACTATCCATCTTCTTTTTGCTATGTTGGAACAATTTTAAGTGGGTCATCCATAGGCGATGATATGGGAGAGCGGTGGGAAAGGAATTCAGAGCTTATTAGTGGAATACGAGTTGTGGGGAAACACTCCTCCGTTAGTGTTTGTATTCACTTCCATGTGTTCTTAGAAACTGACTTGGGTTGTATTAATCTCTTCGCTTTGGTGCTTGGGGATGTGGAACTGAGCCATGTTTTCTATTCTATGGCTGCGACGAAGCCGCTTCTTCAGCTGACTCCACTTGGAGTAGAGACTGATGAAGACACTGAAACCAAAGGTAGTATGTGGGTTTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAGAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTTCTGCGGCTTGCATATCAAAGTCTTGGTGTGGTTTACGGAGATTTGGGCACTTCCCCTTTGTATGTTTTCTACAATACTTTTCCTCATGGGGTTAAAGATCAGGAGGATGTGGTTGGAGCTCTTTCTCTAATTATATACTCTCTTACTCTGGTACCACTCCTCAAATATGTTTTTATTGTACTAAGAGCAAATGACAATGGCCAAGGTGGAACATTGGCGCTTTATTCATTGCTTTGCCGACATGCAAAGATAAAAACCATTCCTAATCAGCACCGTACTGATGAGGAGCTAACAACGTATAGTCGGTCTACCATCCATGAAACGTCATTTGCTGCAAAAACTCAGAGATGGTTAGAAAAAAAAGCTTCTAGGAAGAATGCCATTCTTATTCTCGTCCTTGTTGGCACCTGCATGGTTATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCAGCTGCTGGTGGCATCAAGGTAAATCAACCCGAAATGAGTAATGGTGTAGTTGTGCTGGTTGCTGTTGTAATATTAGTCGGTTTATTTAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAAGTATAGGCATTTTCAACATTTGGAAACATGACAGAAGCGTTTTAAAAGCTTTTATGCCTGTTTATATATATCGGTATTTTAAAAGAGGAGGAAAAGAGGGGTGGACTTCCCTTGGGGGTATAATGCTCAGCATAACAGGGACAGAGGCTCTATTTGCCGACCTATCTCATTTTCCAGTTGCAGCCGTACAGATTGCATTTACTCTAGTTGTGTTTCCTTGTCTTCTTTTAGCCTATTCTGGACAAGCTGCTTACCTAATGAATAACTTGAATCATGCACAAGATGCGTTCTATCGTTCTATTCCAGAAAGCATATAA	1467	0.4179	MVETLLLHKCHPSSKTEHRSIRHRSSYRNLGRYSRVDYPSSFCYVGTILSGSSIGDDMGERWERNSELISGIRVVGKHSSVSVCIHFHVFLETDLGCINLFALVLGDVELSHVFYSMAATKPLLQLTPLGVETDEDTETKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVKDQEDVVGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTIHETSFAAKTQRWLEKKASRKNAILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNQPEMSNGVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGSIGIFNIWKHDRSVLKAFMPVYIYRYFKRGGKEGWTSLGGIMLSITGTEALFADLSHFPVAAVQIAFTLVVFPCLLLAYSGQAAYLMNNLNHAQDAFYRSIPESI	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g3334	488	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	167	487	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi11g3334	488	Pfam	K+ potassium transporter	180	487	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g3334	Glsi-ChrGlsi11	52556581	52589634	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g3334	130	488	Inorganic Solute Cotransporters	AT1G31120	80.780	0.0	581