Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3315 ATGGATAATGGGGACATTGAAGGCAGTGGAGAAGACGATTTTCGCGCACAAAGAGGTCGCAAGTACCGCCCTGTGTTGGACAACGATCGTGCCGTGCTCGAGATGTCTTCTATGGATCCTGGATCGTCTTCTTCTTCATTTCCTGATCAACCTTCTTCTCTCAAAAAAATTAATGTAAATGCAAGTGCAAATGTGGGTTCTGATACAAAAGAAGGCAACTCTCCTCCTCGTGCACAAGCTAATGGCTCACAGGGCGAATCCAAACTGGAATTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGTCTTAAAAGTATGACCGGGGAGCACATTCCACAACCATCTAGTCCTAGAGATGGTGAGAATATTTCCATCACAGTTGGGCAGCCAAAGCCTATGGGTCCACAACTGGGTACAATGATGGGCGTATTCATTCCATGCTTACAAAGCATATTGGGAATCATCTACTACATTCGGTTCTCTTGGATTGTTGGTATGGCTGGCATAGGGGAGTCACTGTTGCTTGTTTCTTTGTGTGGCTTGTGTACTTTCCTTACCTCAATATCACTGAGTGCTATTGCAACTAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTCTATGTTTCTTTCTCGGAAATGCGGTTGCTGGTGCTCTTTATGTGTTGGGGGCCGTAGAAACCTTTTTGAAAGCAGTGCCTTCTGCTGGGATTTTTAGAGAGACTATCACACAAGTTAATGGTACTGCTGTTGCAGAACCAATACAGGCTCCAAGCTCTCATGATTTGCAAATTTATGGGATAGTCGTGACTATTGTTTTATGCTTTGTTGTATTTGGAGGTGTAAAGATGATAAATCGGGTTGCACCTGCTTTTCTGATACCTGTTTTGTTCTCACTATCCTGCATATTTATAGGGATTCTTTTGGCAAGAAGGGATCATCCTGCAGAGGGAATCACGGGGTTGAGTTTGAAGACTTTTAAAGAAAACTGGAGTTCAGATTATCAGAAGACTAATGACAATGGAATTCCAGTAACTGATGGATCCGTAAGCTGGAATTTCAATTCATTGGTTGGGCTCTTTTTCCCAGCTGTAACAGGAATAATGGCAGGTTCAAATCGATCAGCGTCTCTCAAAGATACTCAGCGATCAATTCCAGTTGGAACATTAGCTGCAACTCTTGTAACTTCATCTATGTATTTGGTTTCTGTTTTATTGTTTGGTGCTGTTGCCACCAGAGAGAAGCTATTAACAGATAGGCTACTTACAGCTACAGTTGCATGGCCTTTTCCATCATTAATCAAAATTGGGATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCCTGACAGGTGCCCCACGTCTGCTTGCCGCAATAGCCAATGATGATATTTTACCTGTTCTTAACTACTTCAAAGTTGCTGAGGGCAGTGAGCCTCACCTTGCTACACTTTTCACTGCTTTCCTCTGTATTGGATGTGTCATTATTGGGAATCTGGATCTAATCACTCCAACCATAACTATGTTCTTTCTTCTCTGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGTTGGCGTCCTCGGTGGATTTTTCACCATTGGAGCCTGTCTCTTCTTGGAGCATTACTTTGCATTGTGATCATGTTCTTGATCTCTTGGTCATTCACAGTGGTGTCCTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGCATCAAAGGGAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCATATTTCCAACTAGCGCTTCGCAGCCTTCGGTCACTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATCCCCTTAGTATTCTGCCGGCCTTGGGGCAAATTGCCAGAAAATGTACCCTGCCATCCCAAACTTGCAGACTTTGCCAACTGCATGAAGAAAAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCTGAAGATGCTAAGGCTGCTTGTAAACAGCTCAGTACCTACATTGATTACAAGAATTGTGAAGGTGTAGCTGAGATAGTTGTAGCGCCCAGTATGTCTGAAGGCTTTCGTGGCATCATTCAGACTATGGGCCTCGGCAATCTCAAGCCAAACATGGTGGTGATGCGCTATCCTGAAATATGGCGTCGTGAGAACTTAACAGAAATCCCTGCCACTTTCGTTGGGATAATTAGTGACTGCATTGTAGCAAACAAGGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTATGGTACGATAGATTTGTATTGGATTGTGAGAGATGGTGGTCTCATGCTTCTTCTCTCTCAGCTCCTTCTTACAAAGAAGATTTTTGAGAGTTGCAAGATTCAGGTCTTTTGTATTGCAGAAGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTAAAGAAGTTTCTATATGATCTTCGGATGCAAGCTGAAGTGATTGTCATAACAGTGAAATGGGATGCACAAATGGATGGTGGGTCGCAGCAAGATGAGTCATTTGAAGCATTTACTAATGCTCAGCAAAGAATTGATGATTACTTATCCCGAATGAAGGAAGCAGCCAAAAGAGATGGGACCCCTCTGATGGCCGATGGTAAGCCTGTGGTTGTGAATGAGAAGCAGGTGGAAAAGTTTCTTTACACAACACTGAAGCTCAATTCAACAATTTTGAGATACTCAAGAATGGCAGCAGTTGTGTTGGTAAGTCTGCCTCCACCTCCAGTCAACCACCCGGCATACTTCTATATGGAGTACATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGACGTCGTAACTCTATTCACATAG 2952 0.4373 MDNGDIEGSGEDDFRAQRGRKYRPVLDNDRAVLEMSSMDPGSSSSSFPDQPSSLKKINVNASANVGSDTKEGNSPPRAQANGSQGESKLELFGFDSLVNILGLKSMTGEHIPQPSSPRDGENISITVGQPKPMGPQLGTMMGVFIPCLQSILGIIYYIRFSWIVGMAGIGESLLLVSLCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAVAEPIQAPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLSCIFIGILLARRDHPAEGITGLSLKTFKENWSSDYQKTNDNGIPVTDGSVSWNFNSLVGLFFPAVTGIMAGSNRSASLKDTQRSIPVGTLAATLVTSSMYLVSVLLFGAVATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPVLNYFKVAEGSEPHLATLFTAFLCIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWIFHHWSLSLLGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVAPSMSEGFRGIIQTMGLGNLKPNMVVMRYPEIWRRENLTEIPATFVGIISDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKKIFESCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVIVITVKWDAQMDGGSQQDESFEAFTNAQQRIDDYLSRMKEAAKRDGTPLMADGKPVVVNEKQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3315 983 MobiDBLite consensus disorder prediction 1 85 - -
Glsi11g3315 983 Coils Coil 875 895 - -
Glsi11g3315 983 MobiDBLite consensus disorder prediction 37 85 - -
Glsi11g3315 983 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 113 980 IPR004842 GO:0006811|GO:0015377|GO:0016020
Glsi11g3315 983 NCBIfam K-Cl cotransporter 73 983 IPR004842 GO:0006811|GO:0015377|GO:0016020
Glsi11g3315 983 MobiDBLite consensus disorder prediction 8 28 - -
Glsi11g3315 983 Gene3D Amino acid/polyamine transporter I 136 600 - -
Glsi11g3315 983 FunFam Cation-chloride cotransporter 1 136 600 - -
Glsi11g3315 983 Pfam Amino acid permease 142 618 IPR004841 GO:0016020|GO:0055085
Glsi11g3315 983 Pfam Solute carrier family 12 652 773 IPR018491 GO:0006811|GO:0016020|GO:0022857
Glsi11g3315 983 Pfam Solute carrier family 12 784 982 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3315 137 983 Inorganic Solute Cotransporters AT1G30450 84.080 0.0 1465