Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3284 ATGATATTGGACTCTGAGAATGTGGAAACATGGGAGGCGTCAAAGGAGGATCAGGAAGAGTGGGCTGCTGATCTTTCGCAGCTTTTTATAGGAAACAAGTTTGCCTCTGGAGCTCACAGTCGAATTTACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAAATGGTTAGGATTCCAACCCAGAACGAGGAGAAGAGAACCTTACTAGAGCAGCAATTTAAATCTGAATTTATTGCAGCTTGTAAGAAACCGCCTGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCTCTTTCAATAGAAACAATACTGAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTACATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTAAATGATGAGATGAGGGTTAAGGTGGCAGATTTTGGCACATCCTGTCTTGAAACACAATGCCAGGAAACCAAAGGAAATATGGGGACATATCGTTGGATGGCACCGGAGATGATTAAGGAAAAACCTTATACTTGGAAAGTTGATGTGTATAGTTTTGGAATTGTGCTTTGGGAGCTCACAACCGCTTTACTTCCCTTCCAAGGAATTACCCCTGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAACGAAAGGCCTCCACTGCAGGCTAGTTGTCAGCCTGCGTTTGCACATCTCATAAAGCGTTGCTGGTCGGCAAACCCTTCGAAGCGACCGGATTTCTGTGACATTGTGTCTACTTTGGAGAAGTATGATGAATGTGTCAAGGAAGGCCTACCTCTAACTCATAATTCAGGGTTAGTTAGCAAAAATGACATTATTGAACGCTTAAAAGGTTGTGTCCATGAGCTCCTCTATACCTGTACATGCCTGATTCACCTAGAAGGTATTGTCATTGTCCTCCATCTTTAA 972 0.4311 MILDSENVETWEASKEDQEEWAADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQNEEKRTLLEQQFKSEFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCQETKGNMGTYRWMAPEMIKEKPYTWKVDVYSFGIVLWELTTALLPFQGITPVQAAFAVAEKNERPPLQASCQPAFAHLIKRCWSANPSKRPDFCDIVSTLEKYDECVKEGLPLTHNSGLVSKNDIIERLKGCVHELLYTCTCLIHLEGIVIVLHL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3284 323 ProSiteProfiles Protein kinase domain profile. 28 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g3284 323 CDD STKc_MAP3K-like 35 268 - -
Glsi11g3284 323 SMART serkin_6 28 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g3284 323 Gene3D Transferase(Phosphotransferase) domain 1 97 288 - -
Glsi11g3284 323 PRINTS Tyrosine kinase catalytic domain signature 92 105 IPR001245 GO:0004672|GO:0006468
Glsi11g3284 323 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Glsi11g3284 323 PRINTS Tyrosine kinase catalytic domain signature 176 186 IPR001245 GO:0004672|GO:0006468
Glsi11g3284 323 PRINTS Tyrosine kinase catalytic domain signature 130 148 IPR001245 GO:0004672|GO:0006468
Glsi11g3284 323 PRINTS Tyrosine kinase catalytic domain signature 195 217 IPR001245 GO:0004672|GO:0006468
Glsi11g3284 323 SUPERFAMILY Protein kinase-like (PK-like) 15 268 IPR011009 -
Glsi11g3284 323 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 22 271 - -
Glsi11g3284 323 Gene3D Phosphorylase Kinase; domain 1 15 96 - -
Glsi11g3284 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Glsi11g3284 323 FunFam serine/threonine-protein kinase HT1 97 290 - -
Glsi11g3284 323 Pfam Protein tyrosine and serine/threonine kinase 30 268 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3284 Glsi-ChrGlsi11 44657360 44660381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3284 1 301 MAP Kinase Kinase Kinase AT1G62400 84.494 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi11g3284 PK_Tyr_Ser-Thr 2.7e-56 CL0016