Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3282 ATGGACAATTATCAAGGCGATTTAACTGACATAGTCCGTGCAAGTGGTGGAGCATATGGCAACTGCAGCACAGGTACTTCCTCATCTGAAGCTGCTCCTCTCTCTGACTGGCACCAGTTCTCTTCTAATCCCATCAATTTCTCTTCTGCTATGGAAGATCCCAGAGTCAACTTCGGTGATCCGTTCTCAAACATGCGAGATCCCTTTCTACATGAGCTCAATTTACCTGGTTCTGCCTACTTTAGTTCCACAAATTCTGCTGAAATGATCAGTTCTGGGGGTATAGAAGAAGCAGCTGGTTTTGGTCTTGGTGTTAGTTCTTGTGCTTCTTCTGTTTTGTCTCAACAGATTCTTGAGGATGATATGAGAAGGCCTTGTAACAACATATTCTCACACATGATTCAGATCTCTCCAAATACAAAGTTGCCCGTTTCGCCCCGTGATTCCCCAGTGATGGCTGCTTCGCCGAGAGTAATTATGCCTTCTGCTGTGGTTTCAGGCAACATAATTAATGCAAACAGCTCTAAAGATTGCCTGGTGGACAATACAGGAGTGCAGATCTCATCTCCAAGGAACCCATCTATTAAGCGAAGGCGAGTTTTAACTCCTTCTGATGAAAAGAAGAGCCAGGCAAAGAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAACAGACCAAGTAGTGGAGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATTAAAGGTTCTCCTTATCCAAGGGGTTATTATAGATGCAGCAGCTCGAAGGGTTGCTCTGCAAGAAAACAAGTTGAGAGGAGCAGGACAGACCCAAACTTGTTGGTGATAACTTACACTTCTGAACACAACCATCCATGGCCTACTCAAAGAAACGCTCTTGCTGGCTCAACCCGGTCACAGCCATCCAAGAATAACGATGCTGCTTCAAAGAATTCTGAAGCCTTGCAGCCCCAAAATGGCATGACAAAGGCAAAGGAAGAGCAGCAAGAGAGCAACACTAGTGACAGCCATGTGTCCCCAGTTGTTGCTGGGAACTCAGCCACCAGTACATCTGTAAAGGAGGAGATAGAAGACATGGAGAAGAATCTTGAGATGGAAGATGGAGAATTCAGTGATGTACTGCCTTACAAGCCATCTATGCTGGAGTGCAACCAATCTGAGGATTTCTTTGCAGAATTGGGTGAAATAGAAGCTGACCCACTCAATCTCTTCTTCACTCAAGAGTTTAATGTAACTGATGAGCAGAGAGAATCTAAGGCTTTAGATCCATTCCATCTCTTTGACTGGTCATCAGGAGACAAGACCAACAACACCTCATTTGAAGGACCAAAGAGAGGGTTATAA 1368 0.4503 MDNYQGDLTDIVRASGGAYGNCSTGTSSSEAAPLSDWHQFSSNPINFSSAMEDPRVNFGDPFSNMRDPFLHELNLPGSAYFSSTNSAEMISSGGIEEAAGFGLGVSSCASSVLSQQILEDDMRRPCNNIFSHMIQISPNTKLPVSPRDSPVMAASPRVIMPSAVVSGNIINANSSKDCLVDNTGVQISSPRNPSIKRRRVLTPSDEKKSQAKKVVCIPAPAAANNRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNLLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNDAASKNSEALQPQNGMTKAKEEQQESNTSDSHVSPVVAGNSATSTSVKEEIEDMEKNLEMEDGEFSDVLPYKPSMLECNQSEDFFAELGEIEADPLNLFFTQEFNVTDEQRESKALDPFHLFDWSSGDKTNNTSFEGPKRGL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3282 455 SMART WRKY_cls 234 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3282 455 MobiDBLite consensus disorder prediction 286 360 - -
Glsi11g3282 455 MobiDBLite consensus disorder prediction 198 212 - -
Glsi11g3282 455 MobiDBLite consensus disorder prediction 182 212 - -
Glsi11g3282 455 Pfam WRKY DNA -binding domain 236 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3282 455 SUPERFAMILY WRKY DNA-binding domain 232 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g3282 455 Coils Coil 357 377 - -
Glsi11g3282 455 FunFam probable WRKY transcription factor 14 207 288 - -
Glsi11g3282 455 Gene3D WRKY domain 207 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g3282 455 MobiDBLite consensus disorder prediction 286 363 - -
Glsi11g3282 455 ProSiteProfiles WRKY domain profile. 229 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3282 455 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 418 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3282 Glsi-ChrGlsi11 44174101 44176381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3282 1 445 WRKY Transcription Factor Family AT1G30650 41.215 4.71e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g3282 WRKY 6.8e-25 CL0274