Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3274 ATGCCTTATGCAACAGAACTATCTGCACTTTTTCTTTTCCTGTTTCTGAGCTACGGGGTGCGGTTGAGTCTCCTGATGAATATTAAGGTCTGTAACTTTGCAGCCATGCAGAGCCAGCTTCTGTGTAGTGGGTGTAGGAGCATGTTGCTTTACCCTAGAGGGGCAACTAATGTTTGTTGTGCTTTGTGCAACACAATTACCTCTGTTCCTGCACCAGGTAAGCTTCTTTACTGCCTTCCTATACTCTTAGTAGATTGA 258 0.4457 MPYATELSALFLFLFLSYGVRLSLLMNIKVCNFAAMQSQLLCSGCRSMLLYPRGATNVCCALCNTITSVPAPGKLLYCLPILLVD 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3274 85 NCBIfam zinc finger domain, LSD1 subclass 39 69 IPR005735 -
Glsi11g3274 85 Pfam LSD1 zinc finger 42 66 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3274 Glsi-ChrGlsi11 43337671 43338269 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Glsi11g3274 zf-LSD1 5.2e-12 No_clan