Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3260 ATGGAGGGAGAAGCAGATACCCGCAGAAAACCCAAAATGCATTCTTTCTTCAAGGTCCTGATAGGGGACTATGCCACTAAACTGCGAATTCCTGTACTGTTTACCAATAGATATCGTAGTGTTATACCAAAGAAAGTTGCACTAAGGGCTTCTTCAAATAAATCTTGGAGGGTTGATATTGAGGAAGAGGGTGATAAAGAGCTGTATTTCAAAACGGGTTGGAAAACATTTGCAGAAGATAATCGTTTGGAAAATGGGTAG 261 0.4023 MEGEADTRRKPKMHSFFKVLIGDYATKLRIPVLFTNRYRSVIPKKVALRASSNKSWRVDIEEEGDKELYFKTGWKTFAEDNRLENG 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3260 86 ProSiteProfiles B3 DNA-binding domain profile. 13 86 IPR003340 GO:0003677
Glsi11g3260 86 PANTHER B3 DOMAIN-CONTAINING 10 86 - -
Glsi11g3260 86 Pfam B3 DNA binding domain 16 86 IPR003340 GO:0003677
Glsi11g3260 86 CDD B3_DNA 14 86 IPR003340 GO:0003677
Glsi11g3260 86 SUPERFAMILY DNA-binding pseudobarrel domain 10 86 IPR015300 -
Glsi11g3260 86 Gene3D - 7 86 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3260 16 84 REM Transcription Factor Family AT4G33280 30.435 1.02e-08 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Glsi11g3260 B3 8.1e-11 CL0405