Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3131 ATGCAAACGTCACAGAAACACTCAAGATCAGCTGGTATCCATTTGCACCACCAGCCTGAGAAAAACATTGATCCCTACCACTTGTCTGATTACCAAATTTTAGAAAGCAATTTATGCCATGATAGCCACAATAACAGCGGCCAGGGAACCAGGGTTCCTTATGAAACCTACAAGGAGCCATACTTCCCCCTTGAATCATCCCCAGCAACCACTGCTCTCATAGTTTGTGATTCCCCTTCTAGTGCTAGCATATCATCTAGTAGGAGTCCCTTTTCTTCACAAGGCTCTCATTCATTCTATTCGGATCAGCACCCGTCCTCTGACAATACCTATGGGTCACCAATAAGCTGGTCGTCAAGTGCTGATGAAGGAAATGAACTGAAACACAAACTTAGAGAATTAGAGATTTCATTGTTAGGACCTGAATCTGATATTGTTGATAGTTGTTACTGCTCCTTCAAGGGTGGTTTCCACCAAGCCTCTCCAATGGCTAGACGGAACTGGGATCAGATTGCTGAAATAATTCCAAAGTTAGACTTGAAACAAGTTCTCATTGCCTGTGCACAAGCTGTGTCTGATGGTGATATTCCAACAGCAATAGGCTGGATGGATAATGTATTGGTAAAGATGGTATCGGTCTCTGGAGAGCCAATCCAGAGGTTGGGTGCTTACTTGTTGGAAGGGCTTAGAGCGAGGTTGGAATCATCAGGGAGTCTAATCTACAAGGCCTTGAAATGTGAGCAACCAACAAGCAAAGAATTAATGAGTTACATGCACGTCCTCTATATGATTTGCCCATATTGGAAGTTTGCTTACGTATCTGCAAATGCTGTCATCAAAGAAGCAATGGAAAATGAATCCAAAATTCATATCATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGCTACTTATGCAGGATTTTGCACATTGTCCTGCTGGGCCTCCATCTATTCGCATCACTGGTGTTGATGATTCTCAATCATTTCATGCTCGGGGTGGAGGACTTCATATTGTAGGAGATCGATTGTCAAATTATGCCAAGTCTTGTGGAGTGCCATTTGAGTTCCACAGTGCTGCCATGTCTGGTTGTGAGGTTCAACAAGAAAATCTTGGAGTTCGCCCTGAGGAAGCCCTGGTTGTGAATTTTCCTTATGTTTTGCACCATATGCCGGATGAGAGTGTGAGCACAGAGAACCATAGAGACAGACTATTAAGATTGGTTAAGAGCTTGTCACCCAAGGTTGTGATCCTTGTTGAGCAAGAATCCAAGACCAACACTTCCCCCTTTTTTCAAAGGTTTATTGAGACCCTGGAATATTATACCGCTATGTTTGAATCAATAGATGTGGCCTGCCCCAGAGAGGATAAGCAGCGGATCAGCGCAGAGCAACACTGTGTGGCACGGGACATTGTCAACATGGTAGCTTGTGAGGGGGCTGAGAGGGTGGAAAGGCATGAACTTTTAGGGAAGTGGAGGCTAAGATTTTCCATGGCTGGATTTACACAGTGCCCGTTGAGTTCCTCGGTGGCAGCTGCAGTCAGGGATCTGTTGAAGGAGTTCAATGAAAAGTATAGGCTTGAACAGAAAGATGGTGCTCTCTATTTAGGCTGGATGAACAGAGCTTTAGCCACCTCTTCTGCTTGGAGGTGA 1656 0.4469 MQTSQKHSRSAGIHLHHQPEKNIDPYHLSDYQILESNLCHDSHNNSGQGTRVPYETYKEPYFPLESSPATTALIVCDSPSSASISSSRSPFSSQGSHSFYSDQHPSSDNTYGSPISWSSSADEGNELKHKLRELEISLLGPESDIVDSCYCSFKGGFHQASPMARRNWDQIAEIIPKLDLKQVLIACAQAVSDGDIPTAIGWMDNVLVKMVSVSGEPIQRLGAYLLEGLRARLESSGSLIYKALKCEQPTSKELMSYMHVLYMICPYWKFAYVSANAVIKEAMENESKIHIIDFQIAQGTQWMLLMQDFAHCPAGPPSIRITGVDDSQSFHARGGGLHIVGDRLSNYAKSCGVPFEFHSAAMSGCEVQQENLGVRPEEALVVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVILVEQESKTNTSPFFQRFIETLEYYTAMFESIDVACPREDKQRISAEQHCVARDIVNMVACEGAERVERHELLGKWRLRFSMAGFTQCPLSSSVAAAVRDLLKEFNEKYRLEQKDGALYLGWMNRALATSSAWR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3131 551 ProSiteProfiles GRAS family profile. 171 551 IPR005202 -
Glsi11g3131 551 MobiDBLite consensus disorder prediction 1 23 - -
Glsi11g3131 551 MobiDBLite consensus disorder prediction 94 119 - -
Glsi11g3131 551 Pfam GRAS domain family 180 551 IPR005202 -
Glsi11g3131 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 118 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3131 Glsi-ChrGlsi11 29640612 29642267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3131 1 551 GRAS Transcription Factor Family AT4G17230 59.279 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi11g3131 GRAS 1.2e-124 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g3131 11 29640612 29642267 Glsi11g3131 11 29640612 29642267 ECH