Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3126 ATGCGACGACAAAGGCACACTACGAAGCAGCGGGTATTGCAACTGGTGAAGGACACTTTTGCAAAGCTCAAGTCTTTGAGCGAATCTGATCGTGATGGCGATGCCAATACTAGTAAGAAATTTGAAGATGCTCAGCTAGGTAGAGATTTTCAAACCACGTTGCAAGAGTTCCAGAAAGTGCAACAGCTGGCTTCTGAGAGAGCAAAAGAGGGGGTACTTATTGATGATATTCAATCAATTGTCGATGCTTCTGCTGGAGCAACAACCCAAGCTAGATGGACAGTTGTGAATGGACATTTGTGGATATCTATGATTACTTCTCCTCCTGGCCTGTATGTTCTCTTAAATGGCATATTTGGGATGATGTTTCTGGTGTTGTGTATTTTTCAATTGCTTGCGAAACTCTTGTGCTATGGGTTCTTCTTGGCTATGCTAGAATTTTGGCATTGCTGA 453 0.4283 MRRQRHTTKQRVLQLVKDTFAKLKSLSESDRDGDANTSKKFEDAQLGRDFQTTLQEFQKVQQLASERAKEGVLIDDIQSIVDASAGATTQARWTVVNGHLWISMITSPPGLYVLLNGIFGMMFLVLCIFQLLAKLLCYGFFLAMLEFWHC 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3126 150 SUPERFAMILY t-snare proteins 2 72 IPR010989 GO:0016020|GO:0016192
Glsi11g3126 150 Gene3D - 1 75 - -
Glsi11g3126 150 Pfam Syntaxin-like protein 2 70 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3126 Glsi-ChrGlsi11 29336339 29337738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3126 1 67 SNARE and Associated Proteins AT5G46860 55.224 8.53e-17 73.2