Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi11g3114 | ATGGAATTTCTATCTTCTTTCTTCTTCATTACTTTCTTCCTCTTCTTGCTGCTTTGGCTTGCGAGGAAGTACAAGCAAAGGATCAAAGTTAAGAGTCTAGTCCATCAACTGCCCCCGGGGCCATGGAAGCTACCTCTGATAGGGAACTTGCATCAGCTAGCAGGGGCAGGATCACTTCCACACCGTGCCTTGCGAAAACTAGCCCACAGATATGGACCTCTGATGCACCTGCAACTGGGAGAAATTTCTGCAGTGGTTGTATCATCCCCTGAGATGGCCAAGGAGATAATGAAAACACATGACCTTACTTTTGTGCAGAGGCCAGAACTTCTTTCTCCCAAAATTTTGGCCTACGGGTCAGCAGATATTGCTTTTGCTCCATATGGTGATTACTGGAGACAAATACGGAAGATATGCACGTTAGAGCTTCTAAGTGGCAAACGGGTTCAGTCTTTCTCCTTTGTTCGAGAAGATGAGGTAACAAAACTCATAGAATCAATTCAGATATCCGCAGGTTTACCAATCAACCTTACTACAAGAATTTTCTCTTCGGTAAGTACCATTGTGTGCAGGGCAGCATTTGGTAAGAAATCTGAAGATGAAGATGAACTACTATCTCTGCTCAAAGAAGGAATAGAACTGACAGGAGGATTTGATCTGGCTGATTTGTTTCCTTCACTGAAACCTATTCATCTCATAACTCGCATGGAAGCCAAATTGGAGAAGATGCAAAAGAAGCTGGACAAGATATTAGAAAAGATTGTCAATGAGAATCGAGTAAAGAAGATGAAAGCGAAAGAAGGCAAGGGTGAGTCAGAGGAGGAAAACCTTGTCGATGTTCTCTTACGAGTCCAACAGAGTAGTGACCTCAAGATCCCACTCACAGACAATAACATCAAAGCTATAATTTGGGACATATTCGGTGGTGGAACTGATACTTCAGCAACAGCAATAGAGTGGACTATCTCAGAGCTAATGAAAAACCCAAGAGTAAGAGAAAAGGCACAGGCTGAAATAAGAGGAGCATTCCGGGGAAAGAAAACAATCCATGAGACTGATCTTGCGAAACTTAATTACTTAAAGTCAGTGATCAAAGAAACCATGAGGTTACACCCACCTGTTCCTTTGTTGCTCCCAAGAGAATGCAGGGAAACCTGCAACATTGGGGGATATGAAATACCCATAAAGACTAAAGTCATAGTTAATGCATGGACACTTGGAAGAGATCCGGAGTATTGGTATGATGCTGAGAGCTTCATACCAGAGAGGTTCCATGGCACCTCAGTTGATTTTAAAGGGACCAACTTTGAGTACATACCTTTTGGCGCAGGAAGGAGAATGTGTCCAGGCATTTTATTTGGTTTAGCCAGTATGGAGCTTCCTCTAGCTAGCTTACTCTACCACTTCAACTGGGAACTCCCAAATGGAATGAAACCAGAGGACATGGATATGTCTGAAGCTTTTGGAGCTGCGGTTGGAAGGAAAAATAACCTGTATTTGATTCCCACTCCATATAATCCTTCACTTCATGACAATTTCAGCTCATGTCCTTAA | 1554 | 0.4279 | MEFLSSFFFITFFLFLLLWLARKYKQRIKVKSLVHQLPPGPWKLPLIGNLHQLAGAGSLPHRALRKLAHRYGPLMHLQLGEISAVVVSSPEMAKEIMKTHDLTFVQRPELLSPKILAYGSADIAFAPYGDYWRQIRKICTLELLSGKRVQSFSFVREDEVTKLIESIQISAGLPINLTTRIFSSVSTIVCRAAFGKKSEDEDELLSLLKEGIELTGGFDLADLFPSLKPIHLITRMEAKLEKMQKKLDKILEKIVNENRVKKMKAKEGKGESEEENLVDVLLRVQQSSDLKIPLTDNNIKAIIWDIFGGGTDTSATAIEWTISELMKNPRVREKAQAEIRGAFRGKKTIHETDLAKLNYLKSVIKETMRLHPPVPLLLPRECRETCNIGGYEIPIKTKVIVNAWTLGRDPEYWYDAESFIPERFHGTSVDFKGTNFEYIPFGAGRRMCPGILFGLASMELPLASLLYHFNWELPNGMKPEDMDMSEAFGAAVGRKNNLYLIPTPYNPSLHDNFSSCP | 517 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi11g3114 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | Pfam | Cytochrome P450 | 38 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | Coils | Coil | 233 | 260 | - | - | |
| Glsi11g3114 | 517 | PANTHER | OS08G0105600 PROTEIN | 63 | 507 | - | - | |
| Glsi11g3114 | 517 | Gene3D | Cytochrome P450 | 30 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | SUPERFAMILY | Cytochrome P450 | 38 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | CDD | CYP71-like | 70 | 498 | - | - | |
| Glsi11g3114 | 517 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi11g3114 | 517 | FunFam | Cytochrome P450 71D8 | 30 | 502 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi11g3114 | Glsi-ChrGlsi11 | 29112884 | 29114572 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi11g3114 | 3 | 505 | Cytochrome P450 | AT3G26300 | 42.773 | 7.99e-142 | 416 |