Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3112 ATGTCCGAGACTACTCCTGTTTTTGTGGAGTGGGAGGAGCAAATTATATGCCAGGAGCGGGGGAATCGTGTAACTCACTTCTACTTGAAGGATGCATCAGGGTATTCGGTGCTTGCTGTTGTGGGGACTGAGAGGAGTATAAGGCATATGATGTATGTTGTCTCAGACGAATTTTTGCAGGCATATGGGTCCAGAGATTCCATTTCTGCGTGTAAATGGCGGGCGAGAAGAGAGGTGGTAGACTGGCTCACATGTTTGGTTTCGAGGAATGGTCAACAACATATAGATGAATTGAATGTACAGATGAGTGATTCGGCACAAGCTTTCGAAACTCTCAAAATATTAACAGCTGGAATCAATGCTAGTAAAAAGTATTTACCTGATAAAATGGTTTCAAGGAAATTGAAATTTGAAAGTTCAGATATTGAATGGTCAGGCACTGCTTGGTTTTGTGCTAAACAGCTTAAGCACTACACGGGATTTTGCAGGAATGGGACAACCATATATGTTCATTCATTTGTATATATTATGGCTGAAGAAGATATTCATTATCTTGGTTACTTGGAAGATATGTATGAGGACAAGAAGGGACACAAAAAGGTGAAAGTCAGATGGTTTCACCACGGTCAGGAAGTTAAGAGCGTGATTCCACAGCTGAATCTGCAACCAGGAGAAGTTTTCATCACGCCTCATGTTCAAGTAATTAGTGCTGAGTGTGTGAATGGTCCTGCAACTGTTTTGAGTCCTAAGCATTACGATAAATGCTTGACAGCTGTGCCACATGCATCTTCAACTGAGGTCCATGTGTGCTCTAGGCAGTTTAAAAACAATAAACTTAAGCCATTCACTCTTACTAAGTTGCGTGGGTATAGTAACCAATCTGTGCTCTCTTGTTTGAATAGTCCTATTCTCTCTAAGAGAAAGGTCAAGTGTCAGAAATTGCACAAAGATGATGAAGACTTCTCTCAAGAAGATCCTTTGAGGCCTGGCAGTAAGAGGAATAAAAGTTCTAAAGGATATCAAGTACTGGAAAGGGGTTCTTCTGATCTGCAAAATTCTGCCCATGGGAATCAGAAGATGAAATGTGAACCAACATACCCAAGGCTAAAATTAAGACTATCAAGAAAAACAATGGGTATTAAGTTTATTGGTCCTAAACCCCTGAGTCATCTATCTTTTAAGGCTGATGAAAAGATAGAGCTTCTATGTCAAGATAGTGGTATTAGAGGGTGCTGGTTTAGGTGTAAAATCTTACATATATCCAGAAAGCAGCTGAAGGTCCAGTATGATGATGTACTGGATGTAGATGGACTGGGGAAGCTGGAGGAATGGGTCACTGCATCTAGAGTGGCAGCTCCTGATAAACTGGGTATTCGATGTTCAGGCCGCTTAACAGTAAGACCATGCCCTCCTGAAGATACTGCAGATCGTACTTTTGAGATTGGAGCACCAGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTCATAACTGCAGTCAATGTTTGTGGAGTTGGTATCTTGCAGGTTTATTCCCCAGGTGAAGAGAAGTTCCTAACACTTGAGAAGAAGAACATTCGGATTTCACGAGATTGGGTTGGTAACAGGTGGATCGATATACAGGGGAAGCCTGATATTTGCAGCTTCTTATCTTCAAACGTAGCTTCTAGCATCAAGCTTTCAGCTCATTCCAATGTGGTCAATGGATCTGTGTCTGATTGTCCTGCAATATTGGAGAGTAAATTTTCAACCATTCCCAAAGTTGAAGCCCTTTGCAAGTATGAGCCAGAATTATCTGGTTTGGATACATCTAATGACCTGGAAAATTTGAAAGGGATAACATTGGGGAAACCTCTCTATGTCATTGAAGAAGACAAAGATAATAACTCCGGTGATGCCAATTATGATGTCACTAACAAAAATGATGACAACGATGACACTGATAAAGACAGCAAGGAGAAATTTATAGTGGAGCAAAAATTTGATTCTGCACAACTAAAACTTGATGCAGCAGAAGCAATCAAAGTTGCATGA 2037 0.4114 MSETTPVFVEWEEQIICQERGNRVTHFYLKDASGYSVLAVVGTERSIRHMMYVVSDEFLQAYGSRDSISACKWRARREVVDWLTCLVSRNGQQHIDELNVQMSDSAQAFETLKILTAGINASKKYLPDKMVSRKLKFESSDIEWSGTAWFCAKQLKHYTGFCRNGTTIYVHSFVYIMAEEDIHYLGYLEDMYEDKKGHKKVKVRWFHHGQEVKSVIPQLNLQPGEVFITPHVQVISAECVNGPATVLSPKHYDKCLTAVPHASSTEVHVCSRQFKNNKLKPFTLTKLRGYSNQSVLSCLNSPILSKRKVKCQKLHKDDEDFSQEDPLRPGSKRNKSSKGYQVLERGSSDLQNSAHGNQKMKCEPTYPRLKLRLSRKTMGIKFIGPKPLSHLSFKADEKIELLCQDSGIRGCWFRCKILHISRKQLKVQYDDVLDVDGLGKLEEWVTASRVAAPDKLGIRCSGRLTVRPCPPEDTADRTFEIGAPVDAWWSDGWWEGVITAVNVCGVGILQVYSPGEEKFLTLEKKNIRISRDWVGNRWIDIQGKPDICSFLSSNVASSIKLSAHSNVVNGSVSDCPAILESKFSTIPKVEALCKYEPELSGLDTSNDLENLKGITLGKPLYVIEEDKDNNSGDANYDVTNKNDDNDDTDKDSKEKFIVEQKFDSAQLKLDAAEAIKVA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3112 678 Gene3D - 133 316 IPR043151 -
Glsi11g3112 678 MobiDBLite consensus disorder prediction 315 361 - -
Glsi11g3112 678 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 255 654 - -
Glsi11g3112 678 Pfam Agenet domain 397 471 IPR008395 -
Glsi11g3112 678 CDD Tudor_Agenet_AtDUF_rpt1_3 393 471 - -
Glsi11g3112 678 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Glsi11g3112 678 SMART BAH_4 166 285 IPR001025 GO:0003682
Glsi11g3112 678 MobiDBLite consensus disorder prediction 315 332 - -
Glsi11g3112 678 MobiDBLite consensus disorder prediction 334 359 - -
Glsi11g3112 678 MobiDBLite consensus disorder prediction 627 652 - -
Glsi11g3112 678 SMART agenet_At_2 477 535 IPR014002 -
Glsi11g3112 678 SMART agenet_At_2 391 456 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3112 Glsi-ChrGlsi11 29038016 29043769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3112 405 533 PHD Transcription Factor Family AT5G58610 29.323 8.29e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g3112 11 29038016 29043769 Glsi11g3112 11 29038016 29043769 ECH