Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3108 ATGACGTCCATTCCGTCAAAAAATCTATGGATTCGACGGCAACAATGTCCTTGTGGAGATTGGAAATGTTATATAACATATGAGGGCGATCCTGAGGGGACTTCTTCAGGACCAGAATTGGTGAAGACTGAGAAAGCATCATCAGAAGCTATGGTTGCCCCCTATGTTGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAGTATTATGGGAATTTCGCCAGGAAGAATGGGTTCTCGATTAGGAAAGAAAGATCGAGACTTAGCCCGCAGCTGGGAATTTATAAACGTGACTTTGTTTGTTACCGTTCTGGGTTTGCCCCATTGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGGAAATCTGTGCGGTGTGGATGTGATGCAAAAATGTATCTGTCTAAGGAGATAGTAGAGGGACTTTCCCAATGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAAGTGCGGCTTCTTCCAGCATATCGTAAAATTCAAGAGGCAGATCAAGAGCGTATACTTTTACTTTCTAAAGCTGGGTTTCCAATACACCGGATAGTGAAGATGCTTGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCTTTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAACCGTAAGAAAGTTGTTCAAGAAAATGAGGCATTGCTGAGTGAGAAAAGAGAAAATGATACATTGGAACTTCTTGAGGCATGCAAAGCCATGAAAGAGACGAATGAGGAGTTTTTTTATGATTTTACCGTGGATGAGAATGATAAGGTTGAAAATGTTGCTTGGTCATATAGTGACTCTGTTCATGCGTATGCTATGTTTGGTGATGTGTTTTATTTTGACACTACTTATCGATCAATCACATATGGATTGCTCTTTGGAGCATGGTTTGGTATTGACAACTATGGTAGAACCATTTTCTTTGGTTGTGTTTTATTGCAGGATGAAACACCCCGATCCTTCTCATGGGCATTACAGACTTTTGTCCGATTCATGAGAGGAAGATGTCCACAAACAATTCTAACTGATGTTGACCCAGGGCTTATAGAGGCCATAAGGAGTGAATTGCCAGGCACTAAACATGTGATTTCTCTATGGAATATTATGCCCAAGGTACCCACCTGGTTTTCTCTTCCTCTTGGGTCTCGCTATGCAGAATTTAAATCTGAGTTCGATGCATTATATCACATTGAGAATACAGAGGAATTTGAACTTCGATGGAACCAAATGATATCTGCATTTGGACTTGGTTCAGATAAGCATATTGGCCTACTGTACTCTTTGCGGGCATCTTGGGCACCATCCTATGTGAGAGGTTACTTTCTAGCTCAGATGGTGACCGCAGCTTACTCAAAGTCTATAGATGGATTTTTGAAATGGATCTTCAGGGCACAGACATGTTTGCGTAGCTTCTTTGAGCAGGTTGGCATTTCTGCAAATTGTCAACATCATGCACGTCAGGAGACTCAATTCATACATCTTAAAAGCTGCATACCCATTGAAGAGCATGCACGGAGTAATCTCACACCTTTTGCTTTTAATGCTTTGCAACAAGAATTATTGCTGGCAATGCAATATGCCACATCTGAAATGACCAATGGATCATATATTGTACGCCACTTCAAAAAGATGGATGATGAACGTCTTGTAATATGGTTAGCTGAAGATGAACAGATCCACTGCTCTTGCAAGGAATTTGAATCCTCAGGAATATTATGCAGACATGCTCTTCGTGTATTTGTAATAAAGAATTACTTTCAGCTGCCTGAAAAGTATTATTTAAGTAGATGGCGACAGGAGTCCTCTTTACTTCTTGATGATAATAATAATAATAATCACAGTATTAAGGATGAATGGTTTCAAGAATATCAGTCCCTTGCTGAAACTTTATTTGCAGAATCATCAATTACAAAGGAGCGAGCTGACTATGTTCGGGGAGAATTGACAAAAGAAATTACTAGGATTCTTAGCGAGGTTAGAAATCTGCCCGAGACTGATGGAGTCACCATGGACTTGACTGTTTCACCAACCAGTTAG 2079 0.4016 MTSIPSKNLWIRRQQCPCGDWKCYITYEGDPEGTSSGPELVKTEKASSEAMVAPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPLKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVEGLSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLSEKRENDTLELLEACKAMKETNEEFFYDFTVDENDKVENVAWSYSDSVHAYAMFGDVFYFDTTYRSITYGLLFGAWFGIDNYGRTIFFGCVLLQDETPRSFSWALQTFVRFMRGRCPQTILTDVDPGLIEAIRSELPGTKHVISLWNIMPKVPTWFSLPLGSRYAEFKSEFDALYHIENTEEFELRWNQMISAFGLGSDKHIGLLYSLRASWAPSYVRGYFLAQMVTAAYSKSIDGFLKWIFRAQTCLRSFFEQVGISANCQHHARQETQFIHLKSCIPIEEHARSNLTPFAFNALQQELLLAMQYATSEMTNGSYIVRHFKKMDDERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFVIKNYFQLPEKYYLSRWRQESSLLLDDNNNNNHSIKDEWFQEYQSLAETLFAESSITKERADYVRGELTKEITRILSEVRNLPETDGVTMDLTVSPTS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3108 692 SMART 26again6 573 600 IPR006564 GO:0008270
Glsi11g3108 692 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Glsi11g3108 692 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 642 IPR031052 GO:0006355
Glsi11g3108 692 Pfam SWIM zinc finger 570 594 IPR007527 GO:0008270
Glsi11g3108 692 Pfam MULE transposase domain 291 383 IPR018289 -
Glsi11g3108 692 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3108 Glsi-ChrGlsi11 28939719 28941962 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi11g3108 MULE 1.2e-16 CL0219