Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3099 ATGGGGACTTATCTCAGCACTCCCAAAACTGAGAAGTTTTCTGAAGATGGTGAGAATGACCGACTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCTGATCTAGATGCGTCTACTTCATTTTTTGGTGTTTATGATGGACATGGAGGTAGTTGCAAGTTTTGTGCCAAGTATCTTCACCAACAAGTGCTCAAGAGTGAAGCATATGCAGTGGGAAATATGGGAACCTCGCCTCAGAAAGCCTTTTTCAGCTCTTATTCTAGAAGGTATTCTTTCAATATGCAAAGTTGTGTAAGTGATAGTGGTCTTGTTCTCTAG 351 0.4188 MGTYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGSCKFCAKYLHQQVLKSEAYAVGNMGTSPQKAFFSSYSRRYSFNMQSCVSDSGLVL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3099 116 Gene3D - 1 110 IPR036457 -
Glsi11g3099 116 ProSiteProfiles PPM-type phosphatase domain profile. 23 116 IPR001932 -
Glsi11g3099 116 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Glsi11g3099 116 SUPERFAMILY PP2C-like 3 77 IPR036457 -
Glsi11g3099 116 Pfam Protein phosphatase 2C 23 99 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3099 Glsi-ChrGlsi11 28478224 28479396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3099 1 94 PP2C-type Phosphatase Gene Family AT4G31860 79.167 6.33e-50 158