Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3087 ATGGGCTACAACCATTCCTCAAAGAAGTGTAAGGAGAAGTGGAAGAGCATCAATAAGTACTATAAAAGGACAATAGGGAGCAGGAAGAAGCGATATTTAAATAGTAAAGTTTGCCCTTACTTTGATGAATTGGACATTCTGTACAAAAATGGACTCTTGAATGTTGGAAATACCTTAAGCAATACCAACAATGTTGACAAGATTGAGAAGGAGCAAACTCAGTCTTATGGATATAGTGGTTATCCAATCCTGCTAAAGACAATATCTAGTCTTATTTCTGAGGAGTGCAACCGTAGCCCCCAGCCGCCAGCGCCTCTCAGTCTCTGTGGCTCCATCCACGACTCCCCTCCACTTCCATATGCACAGCAAAACTTTCAATCTCCATTACTGTTGCCTATGGCAAAGCAGAATGTGAGTAGGAGAAATAGCAAAGGAAAGGGTGTGTTTAGCTGTCATGCTTGTTGA 465 0.4194 MGYNHSSKKCKEKWKSINKYYKRTIGSRKKRYLNSKVCPYFDELDILYKNGLLNVGNTLSNTNNVDKIEKEQTQSYGYSGYPILLKTISSLISEECNRSPQPPAPLSLCGSIHDSPPLPYAQQNFQSPLLLPMAKQNVSRRNSKGKGVFSCHAC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3087 154 Gene3D - 1 23 - -
Glsi11g3087 154 Pfam Myb/SANT-like DNA-binding domain 2 45 IPR044822 -
Glsi11g3087 154 PANTHER FI21293P1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3087 Glsi-ChrGlsi11 28133715 28137489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3087 1 53 Trihelix Transcription Factor Family AT1G33240 58.491 1.15e-16 73.9