Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3059 ATGAGAGAAAGGAACACATCATCACAACCCATCTCCGGCTCCATCTCTCAGATTTCGAGCAGAGGGAAAATATTTTGTGCCTGTCATCCTGTTTTGTCCGCTGCTTGGTTTGTTCTTCTGGTCGTTTTTATCTGCATAATGGGTGAACAGTTGGGGATTTTAAAAGTCATAGTCGTGCAAGGCAAACGATTAGTTATCCGGGATTTCAAGAGTAGTGATCCTTATGTTGTAGTCAAACTGGGGAATCAGACAGCAAAGACCAGGGTCATTAACAGTTGCTTAAATCCTGTTTGGAATGAAGAGCTGAGTTTCACTCTGACAGAACCCTTGGGAGTTCTAAATTTGGAAGTATTTGATAAAGATCTTTTGAAGACTGATGACAAGATGGGAAATGCTCACCTCAACCTTCAACCATTAGTCTCTTCAGCTAGATTACGTGACATTTTACGGGTTTCCTCTGGTGAGACAACAATTAGGAAGGTCATACCAGACGGCGAAAACTGCCTTGTTCGTGAGAGCAGCATCAATTGCGTTAATGGTGAGTTGATGCAGAATGTTTGGTTAAGGCTTCGTGGAGTTGAATCTGGTGAGCTCGAATTGACGATCAAGCTGATAACCCCGGTTGCTTCCTCAGTATAG 639 0.4304 MRERNTSSQPISGSISQISSRGKIFCACHPVLSAAWFVLLVVFICIMGEQLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTRVINSCLNPVWNEELSFTLTEPLGVLNLEVFDKDLLKTDDKMGNAHLNLQPLVSSARLRDILRVSSGETTIRKVIPDGENCLVRESSINCVNGELMQNVWLRLRGVESGELELTIKLITPVASSV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3059 212 CDD C2_ArfGAP 51 196 - -
Glsi11g3059 212 PRINTS C2 domain signature 92 105 IPR000008 -
Glsi11g3059 212 PRINTS C2 domain signature 113 121 IPR000008 -
Glsi11g3059 212 PRINTS C2 domain signature 68 80 IPR000008 -
Glsi11g3059 212 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 205 IPR035892 -
Glsi11g3059 212 Pfam C2 domain 52 146 IPR000008 -
Glsi11g3059 212 SMART C2_3c 53 148 IPR000008 -
Glsi11g3059 212 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 50 206 IPR044562 -
Glsi11g3059 212 Gene3D C2 domain 49 210 IPR035892 -
Glsi11g3059 212 ProSiteProfiles C2 domain profile. 31 149 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3059 Glsi-ChrGlsi11 26603008 26614871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3059 47 205 C2H2 Transcription Factor Family AT4G05330 44.025 1.47e-37 131