Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3038 ATGGTTCATAACGGATGTGTTAATGACATTATATGCATCAATAATACATTTTCTCTAAAGAGGTTATTTCAGTCTGGGAATGCAGTGCATGTCAGTGAGTTCTGCTTAAAGTTCATAGAGTTACCATGTGTTCTGAGACTGTCATCTATGGAGAGGAAAGGTTGTTTTGATTTCACACTTACTGATGTTCATATCCCAGACATGGATGGCTATAAACTCCTTAAATATGTTGAGTTCGAAAGGAATCTTCCTGTCATTATCATGTCTTCTGATGATAGAACAAGTGCTATAATGAAGGGACTAAGAAACAGTGCTTGTGATTATTCAATTAAGCTGGCAATTAAGGCAAGTGTTTTCCATCGGATAAGGGAGGTAAAGGCACTGCTTTTGAAATCAGATGAAAATTCTGAGGCATTAGCTCTGATCATTGATGGTAGATGTCTTGCTTATGCACTAAAAGATTATGTGAGGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGCCGTTCATCTCCCAAACAGAAAGCACTGGTAAGTTTTATTTAG 561 0.3761 MVHNGCVNDIICINNTFSLKRLFQSGNAVHVSEFCLKFIELPCVLRLSSMERKGCFDFTLTDVHIPDMDGYKLLKYVEFERNLPVIIMSSDDRTSAIMKGLRNSACDYSIKLAIKASVFHRIREVKALLLKSDENSEALALIIDGRCLAYALKDYVRDLFLELAIGCASVICCRSSPKQKALVSFI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3038 186 Gene3D - 14 140 - -
Glsi11g3038 186 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 125 IPR045279 GO:0009736
Glsi11g3038 186 Pfam Response regulator receiver domain 54 111 IPR001789 GO:0000160
Glsi11g3038 186 SUPERFAMILY CheY-like 52 133 IPR011006 -
Glsi11g3038 186 ProSiteProfiles Response regulatory domain profile. 1 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3038 Glsi-ChrGlsi11 25938600 25942378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3038 98 184 Primary Pumps ATPases AT3G25610 56.322 4.83e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi11g3038 Response_reg 9.7e-08 CL0304