Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3008 ATGGAGGACGATTGGGGCCTTCACGCCGTGGTCAGAGGCTGTGCCGCCGTTACCTCTACCACAACAACCACCACCACAACAACCAGCAGCAATATTTCTACTGCCTCCTCCGTAAATTCCTCTAGTTTGGTGACACCTTCCTGTGGTGGTTTTCCTACGTTCTGTAGGGAACAAGGAGCCCGAGTTTTGTCCCTTTCTGAGCCTTTTGAAGCAAGGCGTTCCATTCCAGAAGTGCATGAGCTTTGGAGGCCATTCTTCCCCAAATCACAGCTTCCTTACTCCTTAAAGACTTCTCCCTTGTCCTTGTCGTCGGCTTCCTTCTCTTATTCCTCGTCTTCACCCAAATCAACTCAAACGCAGCAAAAACAACACCAGCTTCCTAATAAGCAATCTCCTGCTGGCTCTGTCACCAACCCACGATCTAAAAGAAGGAAGAACCAGCTAAAGAAAGTTTGTCAAGTGCCAGCTGAAGCTCTATCCTCAGACATATGGGCATGGCGGAAATATGGGCAGAAACCCATTAAAGGGTCGCCATATCCAAGGGGATACTATAGATGCAGCAGCTCCAAAGTATGCTTAGCTCGCAAACAGGTGGAGCGGAACAGATCGGACCCGACAATGTTCATAGTAACCTACACGGCGGAGCACAACCACCCTGCTCCTACTCATCGGAACTCTCTTGCTGGGTCCACACGCCAGAAGCCACTGACACCCCAAAAACCCGCCGCCGCCGCTGCCGAGTCTGACGGAGCCCTGACGGCGAAACCCATTTCTCCGGCGATCTCTGTGGTGGAAGAAGAGCATGCATCTCAGGGTAAAACTACAAAGTCAGAAAGCAAAGAAGAGAAGGAAGAAAACTTGATGGATGATGATGATGAGGAAGAAAATGAATTTGGGTTCTCTAATAACATGCTAACAGATGATTTCTTCGAGGGTTTAGATGAACTGACAGGGTCGCCGCCGCTTCCGCCGTCTTCTGCGGCGGCCGGAGACTTATTCTCTGACCCATTTTCAGCTGGCATTGCATCTCCTGCTTGGGTGGCTAATGATGCTGCCAGTGCCGCGGGTACTGGCAGCTGA 1080 0.5093 MEDDWGLHAVVRGCAAVTSTTTTTTTTTSSNISTASSVNSSSLVTPSCGGFPTFCREQGARVLSLSEPFEARRSIPEVHELWRPFFPKSQLPYSLKTSPLSLSSASFSYSSSSPKSTQTQQKQHQLPNKQSPAGSVTNPRSKRRKNQLKKVCQVPAEALSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKVCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTPQKPAAAAAESDGALTAKPISPAISVVEEEHASQGKTTKSESKEEKEENLMDDDDEEENEFGFSNNMLTDDFFEGLDELTGSPPLPPSSAAAGDLFSDPFSAGIASPAWVANDAASAAGTGS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3008 359 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3008 359 MobiDBLite consensus disorder prediction 218 237 - -
Glsi11g3008 359 MobiDBLite consensus disorder prediction 111 141 - -
Glsi11g3008 359 MobiDBLite consensus disorder prediction 269 283 - -
Glsi11g3008 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 319 IPR044810 GO:0003700
Glsi11g3008 359 SUPERFAMILY WRKY DNA-binding domain 158 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g3008 359 MobiDBLite consensus disorder prediction 111 152 - -
Glsi11g3008 359 MobiDBLite consensus disorder prediction 284 298 - -
Glsi11g3008 359 ProSiteProfiles WRKY domain profile. 155 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3008 359 FunFam WRKY transcription factor 22 144 214 - -
Glsi11g3008 359 MobiDBLite consensus disorder prediction 216 334 - -
Glsi11g3008 359 Pfam WRKY DNA -binding domain 162 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g3008 359 Gene3D WRKY domain 144 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3008 Glsi-ChrGlsi11 25253473 25254810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g3008 1 356 WRKY Transcription Factor Family AT4G01250 42.588 2.12e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g3008 WRKY 2.6e-24 CL0274