Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2991 ATGTCCTCCTCTTCTTTCTCCCCACCTCACCCCGCCTACGTGACCAACCTCGGCCTGGGCTACTCCATCGCCATCGCCCTTGGCTTTTTAGTCCTTCTTTCCACCCTCATCCTCTCCTCCTACCTCTGCTGCCGCGCCTCCCGCAACCGCTCACGCACCCAGAACAGAAACCCAAACCCGGGTTCCAGCCCCAACGTGTCGAACTCTGATGGGATTGTTCTTCCCCGCATAATCTTCGTGGCTGAGGACGATAATGACCAGCGCGACGATGAAAACGTTGTCATGGGTCTCGATCAGAACGTCATCAACTCCTACCCTCGGTTCCAGTACTGTAAAGATGCTATGGGTGTCGGCGGCGGCGGCAACAATACGACGTGTTCGATCTGTTTGTGTGAGTATAAAGAGTTGGAGATGCTGAGGATGATGCCCGAGTGTCGCCATTTCTTTCACCTCTGTTGTCTCGATTCGTGGTTGAAGCTCAACGGGTCGTGCCCAGTTTGCCGTAACTCGCCTCTGCCGACGCCACTATCGACGCCTCTGCAAGAAGTGGTGCCGCTCTCTCAGTATGCGGCTGATCGAAGGCGAAGGAGGTGA 594 0.5589 MSSSSFSPPHPAYVTNLGLGYSIAIALGFLVLLSTLILSSYLCCRASRNRSRTQNRNPNPGSSPNVSNSDGIVLPRIIFVAEDDNDQRDDENVVMGLDQNVINSYPRFQYCKDAMGVGGGGNNTTCSICLCEYKELEMLRMMPECRHFFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRRR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2991 197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 172 IPR013083 -
Glsi11g2991 197 SMART ring_2 126 167 IPR001841 -
Glsi11g2991 197 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Glsi11g2991 197 SUPERFAMILY RING/U-box 125 173 - -
Glsi11g2991 197 PANTHER RING-H2 FINGER PROTEIN ATL67 9 196 IPR044289 GO:0016567|GO:0016740
Glsi11g2991 197 Pfam Ring finger domain 125 168 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2991 Glsi-ChrGlsi11 24999244 24999837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2991 1 188 C3H Transcription Factor Family AT5G06490 34.500 2.04e-35 121