Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2974 ATGGACGATGAAGAATTCATCATCAACTCTTTCAATCCATATGAAGGTACCTCTATGAATGAGATTGCAGCAGCGATCGGAAACAGCAGCGGGGGTGGCGGGGTTCAAGAGAATATCCAAGAAACAGCTATGGAAGTGGCAATCCCCGGTCGCCGCCCCAGGGGTCGTCCGATGGGCTCAAAGAACAAACCACCGGAGACGATTGTGTGTGTGACGAGGGGTCCGGCGCTTCAAACCCATGTGATGGAGATAACAAACGGAGCCGACATTGGCGAGAGCGTGACTCAGTTCGCCAGAAGCCGGGAACTAGGCCTGTGCATTCTCAGCGGCAGCGGCACTGTCTTCAACCCCATTCTACGCGTGGGCCACCGAAGCGTACCTGGTGAGCTCATGCCACTTCCAGGCCCCTTCCACATACTATATTTAAGGGGTTCCTTTGTGGAAGCACAGGCACTAGGTTCAACGGGTCTGAGACTCAGCCTTTGCGTTGCCACAAGGGAAGGACCAGCGGTTGGCGGTGTGGTGGATGGTCCACTCTGGGCATTAGGACCGGTTATCATAACGGTCGCTGCGTTTTCCGGTGCAAACTATGAGAGATTGGGCATTGAGCCAGAGCTTGTGATCTGCAAGGAAATGGAGATGGCAGCTACCAAGGGTAGCATGAGCAATAGCACAAAAAGCATTCTGAGAGATTTTCTGGGCATTCCATTTCCAAAAGGGGCCAAAGAAGGAAGAGAAATAAAGATGGAAGATGGAAAAAGCAGCATGATCAAAGGCAGAAACAGCTTCGGTCGAAGGATTTCTGGCCGTCCGATTCCCATAAGGGGTCAGGTGAAGCTAGGTATACTGGTGGGGTTGGCCAACTCTTTTGCTTCCATTTTCTCTCGCACTCGACCATCTTCTCCCTCTTCTCGCATCGCTCATTGA 927 0.5221 MDDEEFIINSFNPYEGTSMNEIAAAIGNSSGGGGVQENIQETAMEVAIPGRRPRGRPMGSKNKPPETIVCVTRGPALQTHVMEITNGADIGESVTQFARSRELGLCILSGSGTVFNPILRVGHRSVPGELMPLPGPFHILYLRGSFVEAQALGSTGLRLSLCVATREGPAVGGVVDGPLWALGPVIITVAAFSGANYERLGIEPELVICKEMEMAATKGSMSNSTKSILRDFLGIPFPKGAKEGREIKMEDGKSSMIKGRNSFGRRISGRPIPIRGQVKLGILVGLANSFASIFSRTRPSSPSSRIAH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2974 308 CDD DUF296 78 192 IPR005175 -
Glsi11g2974 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 216 IPR014476 GO:0003680
Glsi11g2974 308 Gene3D - 78 216 - -
Glsi11g2974 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 193 IPR005175 -
Glsi11g2974 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 200 - -
Glsi11g2974 308 ProSiteProfiles PPC domain profile profile. 74 215 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2974 Glsi-ChrGlsi11 24598254 24607911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2974 51 203 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 49.677 3.17e-30 114