Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2938 ATGTTTTCCGTGATGCTGCAGATCAAATGTTATATGCAACAGCTGCTTTGTGGTATTGAACATTGCCACAGTCATGGTGTTCTGCACCGAGACATCAAGGACTCAAATCTTCTTATTGACAAGAATGGAAATCTAAAGATTGGTGATTTTGGGCTAGCATCTTTGTTTCAGCCATCTAATGGGCAGCTTTTAACAAGTCGTGTGGTGACCTTGTGGTACCGACCACCTGAACTTCTACTGGGAGCTACAAATTATGGTGGTGCTGTGGACTTGTGGAGTGCTGGTTGCATTCTTGCTGAGTTGTTTGCTGGAAAGCCAATAATGCCTGGACGAACGGAGGCTCATGTTCTGAAAAATAACCGCATCCACTATTCAGGACCATTGCTCTCTTCAGGACGAAATCTTGAAGAAATGCTCAAGGAGCATGAAAGACAAATCCAACAGGCTGTCCGCAAAGCTCGTTTGGATAAGGTCAAGATAAACAAATCTGACAGTGAGAATGGCAAGGCACCATTAGAATCAGAATGCAGAAGAAAGGCTCTTTTCTTAACATGCATGAGGCCTAAAGCTCATCAAACCCTAAACTTCAAACTCCTCATTCTAGGGGTCTTGGTAGCCTTTTTCCTCCTCTTTGTTCTAAGATCAAACTTTTCTTCCTCCGACCAGGACCTATCTCCAAGTGATGACACAAAGAAGGGTGACACAACAATGGATTGTTCCCTTGCTTGCAACAAGATACCACCTTCTCTTGCTCAAGCTCTAATCCATTACTCAACCTCAACCATAACCCCACAACAAACCCTGAAGGAGATATCAGTAACAGCAAGCGTTTTAGAGAAGAGATCACCCTGCAAATCTTAG 861 0.4355 MFSVMLQIKCYMQQLLCGIEHCHSHGVLHRDIKDSNLLIDKNGNLKIGDFGLASLFQPSNGQLLTSRVVTLWYRPPELLLGATNYGGAVDLWSAGCILAELFAGKPIMPGRTEAHVLKNNRIHYSGPLLSSGRNLEEMLKEHERQIQQAVRKARLDKVKINKSDSENGKAPLESECRRKALFLTCMRPKAHQTLNFKLLILGVLVAFFLLFVLRSNFSSSDQDLSPSDDTKKGDTTMDCSLACNKIPPSLAQALIHYSTSTITPQQTLKEISVTASVLEKRSPCKS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2938 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 27 39 IPR008271 GO:0004672|GO:0006468
Glsi11g2938 286 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2938 286 Gene3D Transferase(Phosphotransferase) domain 1 6 150 - -
Glsi11g2938 286 FunFam Mitogen-activated protein kinase 5 170 - -
Glsi11g2938 286 Coils Coil 132 152 - -
Glsi11g2938 286 Pfam Protein kinase domain 7 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2938 286 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2938 286 SUPERFAMILY Protein kinase-like (PK-like) 6 119 IPR011009 -
Glsi11g2938 286 PANTHER CELL DIVISION PROTEIN KINASE 7 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2938 Glsi-ChrGlsi11 23941097 23945808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2938 7 123 Core Cell Cycle Gene Families AT5G64960 64.103 4.17e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi11g2938 Pkinase 1.2e-38 CL0016