Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2898 ATGTTTTATTTTTTAGTAAACTATCAATTTGATCTTGACATCTATGATGGAGCAGAAGTAGTATCATTTTGCCATAAATGGGATGCGGGACCAGTTGTTGTGGGACCTGAGGCTTCATTTGTTTCAGGTATTGTAAATGATTTAGTCAAGGCTGGAATTCAACCTTTTGGCCCCTCTGCAGAGGCTGCTGCTTTGGAAGGTTCAAAGAGTTTCACGAAGCTTTTGTGTAACAATGCCCAAATACATGGTCTGGGTGCTCCATCTTTTGCTGGTTCATTGAAGAAGCCGAATTGCTCTCATTCTAGAACTGTATTTCTGGGTCAGAGTCTAAATAATTCATCTTATTTTGGGTTTCCCCGTTCTGCATTTTTGAAGTTAAAGGGCACTCCCGGGAGGAGGTATAGTGTGGGACCAGTGAGGATTGTCAATGAGAAAGTTGTGGGTATTGACTTGGGGACGACGAACTCCGCCGTTGCTGCCATGGAAGGTGGAAAACCTACTATCATAACCAACGCCGAGGGTCAAAGGACGACGCCGTCTGTGGTGGCTTATACCAAGAACGGTGACAGGCTTGTGGGTCAAATTGCGAAGCGGCAGGCGGTCGTGAACCCTGAGAACACTTTCTTTTCAGTGAAGAGATTCATTGGGAGAAAGATGTCCGAGGTGGACGAAGAGTCGAAGCAAGTTTCGTACAGGGTGGTGAGGGATGAAAACGGTAATGTGAAACTTGAGTGCCCTGCAATAGGAAAGCAGTTCGCGGCAGAGGAAATTTCAGCCCAGGTGTTGAGGAAGCTTGTGGACGATGCTTCAAAGTTTTTGAATGATCAAGTGACTAAGAAGAACAATGAAACAATTTTGGTGTTTGACCTTGGAGGTGGTACTTTTGATGTTTCAGTACTTGAGGTTGGTGATGGAGTGTTTGAAGTGCTTTCGACCTCTGGGGATACACATTTGGGTGGTGATGACTTCGATAAGAGAATTGTTGATTGGATGGCTACAAACTTCAAGAGAGATGAAGATATAGATCTTTTGAAAGACAAACAAGCTCTTCAGCGCCTCACTGAGACTGCTGAGAAAGCGAAAATGGAGCTGTCATCATTGACTCAAACAAACATAAGTCTGCCATTTATAACTGCTACAGCAGATGGCCCCAAGCACATCGAGACCACCCTTACAAGGGTTAAGTTCGAGGAATTGGCTTCAGATCTTCTTGATAGGCTCAAGACACCAGTTGAAAATGCATTGAGGGATGCAAAACTCTCTATTAAGGATATTGACGAGGTGATACTTGTTGGTGGGTCAACACGAATTTCAGCTGTTCAGGAGCTTGTAAAGAAGATGACTGGAAAGGACCCAAATGTTACTGTCAATCCAGATGAAGTCGTCGCCCTTGGAGCTACTGTTCAGGCTGGTGTCTTGGCTGGAGATGTCAGTGACATTGTGCTGTTGGATGTGACTCCATTGTCTCTGGGTCTGGAAACTCTGGGTGGTGTAATGACAAAAATTATCCCTCGAAACACTACTCTTCCTACCTCAAAGTCCGAGGTCTTCTCAACAGCTGCTGATGGACAGACCAGTGTAGAGATCAATGTCCTCCAGGGCGAGAGAGAATTTGTTAGGGACAATAAATCTCTTGGTAGCTTCCGCTTGGACGGAATCCCTCCTGCACCTCGTGGGGTTCCTCAAATTGAGGTGAAATTTGATATTGATGCCAATGGCATTCTCTCTGTCACTGCTGTAGATAAGGGCACAGGGAAGAAGCAAGATATTACTATTACAGGTGTTAGCACTTTGCCCAATGATGAGGTAGAAAGGATGGTAAAAGAGGCAAAGAAATTTGCAAAGGAGGACAAAGAGAAGAGGGATGCTATTGACACAAAGAATCAGGCAGCTTCTGTCGTCTACCAGACAGAGAAGCAGTTGAAAGAGTTGGGAGACAAGGTTCCTGGCCCTGTGAAAGAGAAGCTCGAAGCTAAACTGGGAGAGCTTAAAGACGCAATTTCTGGCGGATCAACACAAGCCATTAAGGATTCCATGGCTGCCCTCAATCAGGAGGTCATGCAGCTTGGTCAATCCCTATACAACCAGCCAGGAGCTGCAGGGGCAGGGGCAGGGCCTGCGCCACCTGGTGGTGAATCTGGCTCTGGTCCTTCAGAATCATCAGGCAAGGGACCCGATGGGGAAGTGATTGATGCAGATTTTACTGACTCTAAATGA 2217 0.4592 MFYFLVNYQFDLDIYDGAEVVSFCHKWDAGPVVVGPEASFVSGIVNDLVKAGIQPFGPSAEAAALEGSKSFTKLLCNNAQIHGLGAPSFAGSLKKPNCSHSRTVFLGQSLNNSSYFGFPRSAFLKLKGTPGRRYSVGPVRIVNEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDQVTKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWMATNFKRDEDIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRVKFEELASDLLDRLKTPVENALRDAKLSIKDIDEVILVGGSTRISAVQELVKKMTGKDPNVTVNPDEVVALGATVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVTAVDKGTGKKQDITITGVSTLPNDEVERMVKEAKKFAKEDKEKRDAIDTKNQAASVVYQTEKQLKELGDKVPGPVKEKLEAKLGELKDAISGGSTQAIKDSMAALNQEVMQLGQSLYNQPGAAGAGAGPAPPGGESGSGPSESSGKGPDGEVIDADFTDSK 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2898 738 SUPERFAMILY PreATP-grasp domain 9 67 IPR016185 -
Glsi11g2898 738 ProSitePatterns Heat shock hsp70 proteins family signature 1. 149 156 IPR018181 -
Glsi11g2898 738 Gene3D - 457 471 - -
Glsi11g2898 738 Gene3D - 145 281 - -
Glsi11g2898 738 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 475 630 IPR029047 -
Glsi11g2898 738 FunFam Molecular chaperone DnaK 598 699 - -
Glsi11g2898 738 Pfam Phosphoribosylglycinamide synthetase, N domain 15 66 IPR020562 GO:0004637|GO:0009113
Glsi11g2898 738 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 696 IPR029048 -
Glsi11g2898 738 Gene3D - 598 697 IPR029048 -
Glsi11g2898 738 SUPERFAMILY Actin-like ATPase domain 146 279 IPR043129 -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 425 441 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 456 476 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 560 576 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 196 204 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 145 158 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 479 498 - -
Glsi11g2898 738 PRINTS 70kDa heat shock protein signature 173 185 - -
Glsi11g2898 738 Gene3D Actin; Chain A, domain 4 319 406 - -
Glsi11g2898 738 MobiDBLite consensus disorder prediction 693 738 - -
Glsi11g2898 738 FunFam Molecular chaperone DnaK 320 407 - -
Glsi11g2898 738 Coils Coil 343 370 - -
Glsi11g2898 738 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 472 595 IPR029047 -
Glsi11g2898 738 Gene3D - 6 59 - -
Glsi11g2898 738 ProSitePatterns Heat shock hsp70 proteins family signature 2. 287 300 IPR018181 -
Glsi11g2898 738 SUPERFAMILY Actin-like ATPase domain 282 473 IPR043129 -
Glsi11g2898 738 Gene3D - 282 456 - -
Glsi11g2898 738 FunFam Stromal 70 kDa heat shock-related protein 471 596 - -
Glsi11g2898 738 PANTHER HEAT SHOCK PROTEIN 70KDA 282 657 IPR013126 GO:0005524|GO:0140662
Glsi11g2898 738 Pfam Hsp70 protein 279 694 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2898 Glsi-ChrGlsi11 23155037 23162672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2898 147 731 Calmodulin-binding Proteins AT5G02490 41.846 4.15e-142 430