Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2894 ATGGAGAACCAGATACCAAATTGGTTTCACAGAGTGAAGCCATTCATAGCTGTTGTATTCTTGCAGTCTGGATTTGCCGGTATGGATGTTCTATCCAAGGCTGCACTAAACAAGGGCATGAGCAATTATGTGCTCGTCGTCTACCGCCATGTTGTTGCCTTCCTTGTCGTCACCCCTTTTGCAGTGTTCCTAGACAAGAAAGTTAGGCCAAAGATGACATTTTCGATCTTCATGAAAATAGTGGCCCTAAGCGTGCTAGAGCCAGTTATTGACCAAAATTTGTACTTTCTGGGAATGAAATACACAACAGCAACCTTTGCAGCTGCAATGACTAATATTCTTCCTGCCATCACCTTCATGATGGCTTGCATTCTTAGGATGGAGAAGTTAAAAATGACAAGTATACGCAGTCAAGCGAAGGTATTTGGGACTCTAGCAACTGTTGCGGGAGCCATGGTCATGACACTGATGAAAGGTCCGGTGCTTGAATTATTTGGAACACACGGAAGCAGCAGCCATAACCAACATAGTAGCGGGGCAAATCTTCAACACGCAATAAAGGGATCCGTGATGATCACAATTGGCTGCTTTAGCTGGGCGTGTTTCATGATTCTCCAAGCAGTTACCCTTGAAACATATCCTGCCGAGCTCTCTCTTACAGCATGGATATGCCTGTTGGGAACAGTTGAAGGTACCGTAGTAGCCCTGATTATGGAAAGGGGCAACCCTTCGATTTGGTCTATACATTGGGATACGAAACTGCTGGCCGCTGTCTACAGTGGCATATTCTGCTCAGGACTGGCTTATTACATCCAAGGAGTAGTGATGAAAACTAGAGGTCCAGTCTTTGTGACAGCGTTTAGCCCCCTCTGCATGGTAATTGTGGCTGTCATGGGTTCCTTCATTCTGGCTGAGCAATTGTACCTTGGAAGGGTGATTGGTGCCGTTGTCATTGTTTTGGGCCTGTACCTTGTGGTGTGGGGTAAAAGCAAAGATTACGGCTCACCAACTCCAATTACCAAAGAGCATATATCACCTACCAAGCTCATAGCAGATGAGGGCAATGCCAGAAAGGAGCATTCTAATCACGAGGTCATCACTATCAATAATTTTGGAGCAGGAATCATAACTCGAGATGAAAAAGTATGA 1149 0.4526 MENQIPNWFHRVKPFIAVVFLQSGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFLVVTPFAVFLDKKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAAAMTNILPAITFMMACILRMEKLKMTSIRSQAKVFGTLATVAGAMVMTLMKGPVLELFGTHGSSSHNQHSSGANLQHAIKGSVMITIGCFSWACFMILQAVTLETYPAELSLTAWICLLGTVEGTVVALIMERGNPSIWSIHWDTKLLAAVYSGIFCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAVMGSFILAEQLYLGRVIGAVVIVLGLYLVVWGKSKDYGSPTPITKEHISPTKLIADEGNARKEHSNHEVITINNFGAGIITRDEKV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2894 382 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Glsi11g2894 382 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Glsi11g2894 382 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Glsi11g2894 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Glsi11g2894 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2894 Glsi-ChrGlsi11 23089838 23091904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2894 2 372 Nodulin-like Gene Family AT2G37460 65.499 1.65e-179 502